RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ACSL3O95573 720 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 RHOXF2BP0C7M4 288 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 ITGAXP20702 1163 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC26A3P40879 764 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 FOLR3P41439 243 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 OR1D4P47884 311 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 CCR8P51685 355 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 C19orf57Q0VDD7 668 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 KCNAB2Q13303 367 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 UAP1Q16222 522 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 HKDC1Q2TB90 917 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 CDKL4Q5MAI5 379 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 MROH9Q5TGP6 573 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 CMC1Q7Z7K0 106 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 THOC6Q86W42 341 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 RAB43Q86YS6 212 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 OR4K1Q8NGD4 311 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 KIAA1191Q96A73 305 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 PTERQ96BW5 349 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 RHBDF1Q96CC6 855 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 MVB12AQ96EY5 273 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 C10orf90Q96M02 699 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 RHOXF2Q9BQY4 288 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 SARGQ9BW04 601 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 UNKQ9C0B0 810 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 CDC14AQ9UNH5 594 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 DYRK1BQ9Y463 629 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 KCNE2Q9Y6J6 123 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 KALRNO60229 2985 aa13.17□□□□□ -0.3
HERPUD1-218ENST00000569569 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 FEZF1A0PJY2 475 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 LCMT2O60294 686 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 CNOT3O75175 753 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 C1QL1O75973 258 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC35E2BP0CK96 405 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 FAM53BQ14153 422 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 NKG7Q16617 165 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 NDUFA9Q16795 377 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 COX15Q7KZN9 410 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 TBC1D1Q86TI0 1168 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 GPSM1Q86YR5 675 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 TCAIMQ8N3R3 496 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 METTL27Q8N6F8 245 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 CAMKVQ8NCB2 501 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 STAG3L4Q8TBR4 150 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC5A11Q8WWX8 675 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 NEIL2Q969S2 332 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 TM4SF19Q96DZ7 209 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 IP6K3Q96PC2 410 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC25A18Q9H1K4 315 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 WDR54Q9H977 334 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 L2HGDHQ9H9P8 463 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 NMRAL1Q9HBL8 299 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 TLK1Q9UKI8 766 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 ACOT9Q9Y305 439 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 IKBKGQ9Y6K9 419 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 MAU2Q9Y6X3 613 aa13.16□□□□□ -0.3
HERPUD1-218ENST00000569569 A0A087WUV0 522 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 A0A087X1B8 175 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 HMX2A2RU54 273 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 NCF1BA6NI72 391 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 NCF1CA8MVU1 366 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 P2RX6O15547 441 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 PRPF4O43172 522 aaKnown RBP eCLIP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 C2P06681 752 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 INHBAP08476 426 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 LTA4HP09960 611 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 NCF1P14598 390 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 OTX2P32243 289 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 GGT5P36269 586 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC6A12P48065 614 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 PMS2P54278 862 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 BMPR2Q13873 1038 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 OR4D1Q15615 310 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 CATSPEREQ5SY80 951 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 SULT1C3Q6IMI6 304 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 VN1R4Q7Z5H5 301 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 ISCA2Q86U28 154 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 KLHDC8AQ8IYD2 350 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 ARHGEF39Q8N4T4 335 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 DTWD1Q8N5C7 304 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 TBC1D19Q8N5T2 526 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 TMEM102Q8N9M5 508 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 MFSD9Q8NBP5 474 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 NACC2Q96BF6 587 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 CNOT10Q9H9A5 744 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 ACSS2Q9NR19 701 aa13.15□□□□□ -0.3
HERPUD1-218ENST00000569569 NXT1Q9UKK6 140 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms