RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 IGLV2-11P01706 119 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 MMP1P03956 469 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 FYNP06241 537 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 SRPRAP08240 638 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 DESP17661 470 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 MARK3P27448 753 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CD52P31358 61 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 NBL1P41271 181 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PRKCIP41743 596 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 SUOXP51687 545 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CSE1LP55060 971 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 HAND2P61296 217 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 POU3F1Q03052 451 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 RELQ04864 619 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PTK6Q13882 451 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 TUBB2AQ13885 445 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ANGPT1Q15389 498 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 STXBP2Q15833 593 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 MEP1BQ16820 701 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 NHSL2Q5HYW2 709 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PLPP4Q5VZY2 271 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 KRT79Q5XKE5 535 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ZSCAN25Q6NSZ9 544 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 GFRALQ6UXV0 394 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CCNI2Q6ZMN8 369 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 MEX3BQ6ZN04 569 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PQLC2Q6ZP29 291 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 C9orf139Q6ZV77 190 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CAMKMTQ7Z624 323 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 DSG4Q86SJ6 1040 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ZNF329Q86UD4 541 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 SERINC5Q86VE9 423 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM219Q86XT9 240 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CCDC13Q8IYE1 715 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 C10orf53Q8N6V4 93 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 TC2NQ8N9U0 490 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 HJURPQ8NCD3 748 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 BBS10Q8TAM1 723 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 HMGCLL1Q8TB92 370 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 LNX1Q8TBB1 728 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 SECTM1Q8WVN6 248 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 DNAJB3Q8WWF6 145 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PIBF1Q8WXW3 757 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CORO2AQ92828 525 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ABTB1Q969K4 478 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PTERQ96BW5 349 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 RHBDF1Q96CC6 855 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ZNF689Q96CS4 500 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ARHGEF26Q96DR7 871 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CFAP57Q96MR6 1250 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 RUNDC3BQ96NL0 473 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 DACH2Q96NX9 599 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ATP6V0BQ99437 205 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 C16orf70Q9BSU1 422 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 TUBB2BQ9BVA1 445 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 FAM49AQ9H0Q0 323 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 NAPBQ9H115 298 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 S1PR5Q9H228 398 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 POMKQ9H5K3 350 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PCDH9Q9HC56 1237 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 SDF2L1Q9HCN8 221 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 RANGRFQ9HD47 186 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PFDN4Q9NQP4 134 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 MBNL1Q9NR56 388 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ASAH2Q9NR71 780 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 DDX43Q9NXZ2 648 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 CACNG4Q9UBN1 327 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 TBK1Q9UHD2 729 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 AMACRQ9UHK6 382 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 BLOC1S6Q9UL45 172 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 PLAGL1Q9UM63 463 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 RABL2BQ9UNT1 228 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 ERVK-11Q9UQG0 969 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 VDAC3Q9Y277 283 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 KCNK7Q9Y2U2 307 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 MTF2Q9Y483 593 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 KMT2BQ9UMN6 2715 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 DMXL1Q9Y485 3027 aa3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 BAZ2BQ9UIF8 2168 aaKnown RBP3.21□□□□□ -1.9
HMGB1P6-201ENST00000569046 VPS13AQ96RL7 3174 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 FAM237AA0A1B0GTK4 181 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CCDC69A6NI79 296 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 TRIM64CA6NLI5 447 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 C5orf67F2Z3F1 127 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 BMPR1BO00238 502 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 VCYO14598 125 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 CAPN9O14815 690 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 STAM2O75886 525 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PENKP01210 267 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 LGALS2P05162 132 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 DCNP07585 359 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 UMODP07911 640 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 HOXB5P09067 269 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PDHBP11177 359 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 PCP11498 1178 aaKnown RBP3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 MMP9P14780 707 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 ITGA2P17301 1181 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 GAP43P17677 238 aa3.2□□□□□ -1.9
HMGB1P6-201ENST00000569046 S1PR1P21453 382 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms