RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MEP1AQ16819 746 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 BTBD16Q32M84 506 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 SUSD1Q6UWL2 747 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 SPNS3Q6ZMD2 512 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 PCGF5Q86SE9 256 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 ZNF295-AS1Q8N0V1 137 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 CCDC89Q8N998 374 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 FBXO15Q8NCQ5 510 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 BIRC8Q96P09 236 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 CYTH2Q99418 400 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 UTP23Q9BRU9 249 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 BFARQ9NZS9 450 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 TAC3Q9UHF0 121 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 DRG1Q9Y295 367 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 VPS9D1Q9Y2B5 631 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 MEMO1Q9Y316 297 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 POLQO75417 2590 aa14.9□□□□□ -0.02
HERPUD1-215ENST00000568676 TCRBV7S2A1N4TA0A589 114 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 KRT87PA6NCN2 255 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 A8MUI8 341 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 ARHGEF33A8MVX0 844 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 FFAR3O14843 346 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 GPR42O15529 346 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 CD46P15529 392 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 YBX1P67809 324 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 ALDH6A1Q02252 535 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 TYSND1Q2T9J0 566 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 CTSL3PQ5NE16 218 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 ARMC3Q5W041 872 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 LGI4Q8N135 537 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 RNF214Q8ND24 703 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 MDS2Q8NDY4 140 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 M1APQ8TC57 530 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 ADAMTS18Q8TE60 1221 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 PHF10Q8WUB8 498 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 CHTF18Q8WVB6 975 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 ATG4AQ8WYN0 398 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 SCMH1Q96GD3 660 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 HES6Q96HZ4 224 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 FAM129AQ9BZQ8 928 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 VN1R1Q9GZP7 353 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 PCYOX1Q9UHG3 505 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 TINAGQ9UJW2 476 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 ITGB1BP2Q9UKP3 347 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 ADGRG4Q8IZF6 3080 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 PKDREJQ9NTG1 2253 aa14.89□□□□□ -0.03
HERPUD1-215ENST00000568676 KIF5CO60282 957 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 SEC24DO94855 1032 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 CHRM3P20309 590 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 FMO4P31512 558 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 PMP22Q01453 160 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 KIF5AQ12840 1032 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 TUBA3CQ13748 450 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 SYT16Q17RD7 645 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 KRTAP21-3Q3LHN1 58 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 TTLL9Q3SXZ7 439 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 MINDY4Q4G0A6 757 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 SEL1L2Q5TEA6 688 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 MEI1Q5TIA1 1274 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 TUBA3EQ6PEY2 450 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 KIAA1328Q86T90 577 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 BEST3Q8N1M1 668 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 GHDCQ8N2G8 530 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 SLC5A8Q8N695 610 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 LPGAT1Q92604 370 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 THAP11Q96EK4 314 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 KCNK13Q9HB14 408 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 MMP25Q9NPA2 562 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 KLHL42Q9P2K6 505 aa14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 PACSIN2Q9UNF0 486 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 REXO2Q9Y3B8 237 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 NCOA6Q14686 2063 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-215ENST00000568676 KCNE1BA0A087WTH5 132 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 A0A0U1RQJ8 604 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 E5RI56 91 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 E7ENX8 843 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 E9PLN8 166 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 FANCGO15287 622 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 SLC16A8O95907 504 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 OGNP20774 298 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 IL10P22301 178 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 SESN2P58004 480 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 RPS15AP62244 130 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 TAP2Q03519 686 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 TSTA3Q13630 321 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 TESK1Q15569 626 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 OR1C1Q15619 314 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 KLHL38Q2WGJ6 581 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 MFSD4BQ5TF39 518 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 ADCK2Q7Z695 626 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 ZNF480Q8WV37 535 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 FRMD6Q96NE9 622 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 PKP4Q99569 1192 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 VKORC1Q9BQB6 163 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 KIFC1Q9BW19 673 aa14.87□□□□□ -0.03
HERPUD1-215ENST00000568676 ENKD1Q9H0I2 346 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms