RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TMEM121Q9BTD3 319 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 SYNPO2LQ9H987 977 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 TNFRSF10DQ9UBN6 386 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 GNPTGQ9UJJ9 305 aa11.15□□□□□ -0.62
GTF3C1-209ENST00000568569 IGKV1-8A0A0C4DH67 115 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ERI2A8K979 691 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 GABRR3A8MPY1 467 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 FOXO6A8MYZ6 492 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 H0YIG0 161 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ADAM10O14672 748 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ERGP11308 486 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 HOXB4P17483 251 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ADRA1DP25100 572 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 RPA3P35244 121 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 AVPR1BP47901 424 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 AGTR2P50052 363 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 GDF10P55107 478 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 RWDD2BP57060 319 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 HSF1Q00613 529 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 OC90Q02509 493 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 RELAQ04206 551 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 MFSD4BQ5TF39 518 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ZNF425Q6IV72 752 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 SUSD1Q6UWL2 747 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 LDB1Q86U70 411 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 PAQR7Q86WK9 346 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 CNGA4Q8IV77 575 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 CHERPQ8IWX8 916 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 TAB3Q8N5C8 712 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 SLC5A8Q8N695 610 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 SMPDL3AQ92484 453 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ZNF778Q96MU6 729 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 TMUB1Q9BVT8 246 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 MMP25Q9NPA2 562 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 CATSPERZQ9NTU4 200 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 PCYOX1Q9UHG3 505 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ASB1Q9Y576 335 aa11.14□□□□□ -0.63
GTF3C1-209ENST00000568569 ABCA4P78363 2273 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 FAM221AA4D161 298 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 GOLGA6L9A6NEM1 432 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 CDK2AP1O14519 115 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 P2RX6O15547 441 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 ZNHIT1O43257 154 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 NEURL1O76050 574 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 CCNDBP1O95273 360 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 PTMAP06454 111 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 SP1P08047 785 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 TSTA3Q13630 321 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 PTK6Q13882 451 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 ARHGAP19Q14CB8 494 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 MAPKAPK3Q16644 382 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 SLC25A25Q6KCM7 469 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 PPP1R21Q6ZMI0 780 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 TMEM200AQ86VY9 491 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 LRRC6Q86X45 466 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 VSTM4Q8IW00 320 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 LGI4Q8N135 537 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 OR9A1PQ8NGU1 263 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 M1APQ8TC57 530 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 NPAS2Q99743 824 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 P2RY12Q9H244 342 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 LRFN1Q9P244 771 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 MARCH4Q9P2E8 410 aaPredicted RBP11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 TAC3Q9UHF0 121 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 R3HDM2Q9Y2K5 976 aaKnown RBP11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 TCAF1Q9Y4C2 921 aa11.13□□□□□ -0.63
GTF3C1-209ENST00000568569 MYO1CO00159 1063 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 SLC25A12O75746 678 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 MATN4O95460 622 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 NSA2O95478 260 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 RPS3P23396 243 aaKnown RBP eCLIP11.12□□□□□ -0.635e-6■■■■□ 24.1
GTF3C1-209ENST00000568569 ATP5DP30049 168 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 DNAJA1P31689 397 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 HSD17B2P37059 387 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ANP32AP39687 249 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ST13P50502 369 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 TAS2R50P59544 299 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 PRDX1Q06830 199 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ANKRD20A4Q4UJ75 823 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ICE2Q659A1 982 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ADCK2Q7Z695 626 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 FGD2Q7Z6J4 655 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ANKRD37Q7Z713 158 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 MMP21Q8N119 569 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 MPP5Q8N3R9 675 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 CHDHQ8NE62 594 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 OR9A4Q8NGU2 314 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 OR51Q1Q8NH59 317 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 MCOLN3Q8TDD5 553 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ASB5Q8WWX0 329 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ALG3Q92685 438 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 CALR3Q96L12 384 aaKnown RBP11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 OLFM1Q99784 485 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 ZNF559Q9BR84 538 aa11.12□□□□□ -0.63
GTF3C1-209ENST00000568569 NPDC1Q9NQX5 325 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms