RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	ZFX	P17010	805 aa	Predicted RBP	12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	PRKCI	P41743	596 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	AGTR2	P50052	363 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	TAS2R40	P59535	323 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	MAT1A	Q00266	395 aa	Known RBP	12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	KLHL30	Q0D2K2	578 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	HMBOX1	Q6NT76	420 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	ZNF585A	Q6P3V2	769 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	LIAT1	Q6ZQX7	453 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	DCUN1D3	Q8IWE4	304 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	VWA5B2	Q8N398	1253 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	C16orf52	Q8NHV5	167 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	ENOX1	Q8TC92	643 aa	Known RBP	12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	RAPGEF5	Q92565	580 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	MIPEP	Q99797	713 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	RAB11FIP5	Q9BXF6	653 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	DRC3	Q9H069	523 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	ATG10	Q9H0Y0	220 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	PNPLA3	Q9NST1	481 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	RUVBL1	Q9Y265	456 aa	Known RBP	12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	KLK4	Q9Y5K2	254 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	MXRA5	Q9NR99	2828 aa		12.94	□□□□□ -0.34
SMG1-213	ENST00000567737	TRBV5-4	A0A0C4DH59	114 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	LRRD1	A4D1F6	860 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	SOWAHD	A6NJG2	315 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737		H0YGG7	62 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	NRP2	O60462	931 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	VPS26A	O75436	327 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	AGT	P01019	485 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	TACR1	P25103	407 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	TPP2	P29144	1249 aa	Predicted RBP	12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	ARHGAP25	P42331	645 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	ITGA8	P53708	1063 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	ARF3	P61204	181 aa	Predicted RBP	12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	CBLB	Q13191	982 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	NAA25	Q14CX7	972 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	GARNL3	Q5VVW2	1013 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	LRRC8B	Q6P9F7	803 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	PODNL1	Q6PEZ8	512 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	PAPD4	Q6PIY7	484 aa	Known RBP	12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	CAPN12	Q6ZSI9	719 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	PID1	Q7Z2X4	250 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	ANKRD37	Q7Z713	158 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	RPS19BP1	Q86WX3	136 aa	Known RBP	12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	CPNE8	Q86YQ8	564 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	SULF2	Q8IWU5	870 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	CSNK1A1L	Q8N752	337 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	OR2L3	Q8NG85	312 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	OR52N2	Q8NGI0	321 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	OR5M9	Q8NGP3	310 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	CREB3L4	Q8TEY5	395 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	LPAR4	Q99677	370 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	PLCD4	Q9BRC7	762 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	DEFB127	Q9H1M4	99 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	SMARCAL1	Q9NZC9	954 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	B4GALT7	Q9UBV7	327 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	SCN2A	Q99250	2005 aa		12.93	□□□□□ -0.34
SMG1-213	ENST00000567737	ZNF487	B1APH4	448 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	FAM47E-STBD1	D6RA91	191 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	SYT5	O00445	386 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	CCL22	O00626	93 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	FOXS1	O43638	330 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	PEX1	O43933	1283 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	IFNA2	P01563	188 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	BMP7	P18075	431 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	PSMB5	P28074	263 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	CSE1L	P55060	971 aa	Known RBP	12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	DYNLT1	P63172	113 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	ACTN3	Q08043	901 aa	Predicted RBP	12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	WASHC5	Q12768	1159 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	HKDC1	Q2TB90	917 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	BZW1	Q7L1Q6	419 aa	Known RBP	12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	ZNF227	Q86WZ6	799 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	CXorf67	Q86X51	503 aa	Predicted RBP	12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	RFX6	Q8HWS3	928 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	LRRC75A-AS1	Q8N1F1	130 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	ZFP62	Q8NB50	900 aa	Predicted RBP	12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	CFAP61	Q8NHU2	1237 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	TFB1M	Q8WVM0	346 aa	Known RBP	12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	C19orf43	Q9BQ61	176 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	RSPH14	Q9UHP6	348 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	FAM215A	Q9Y5M1	114 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	PRSS21	Q9Y6M0	314 aa		12.92	□□□□□ -0.34
SMG1-213	ENST00000567737	BCKDK	O14874	412 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	SMPD2	O60906	423 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	OR56A5	P0C7T3	313 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	ADH7	P40394	386 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	AVPR1B	P47901	424 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	ZNF140	P52738	457 aa	Predicted RBP	12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	PTK6	Q13882	451 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	GRB7	Q14451	532 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	MESD	Q14696	234 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	DBN1	Q16643	649 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	CATSPERE	Q5SY80	951 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	FBXO42	Q6P3S6	717 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	TTC23L	Q6PF05	361 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	RAB42	Q8N4Z0	105 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	ZNF592	Q92610	1267 aa		12.91	□□□□□ -0.34
SMG1-213	ENST00000567737	SPATA13	Q96N96	652 aa		12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms