RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ACPPP15309 386 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 HOXB4P17483 251 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 TCP1P17987 556 aaKnown RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 HIST1H2ADP20671 130 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 HRH2P25021 359 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 GLRBP48167 497 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 SOX8P57073 446 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 ARF3P61204 181 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 AP2B1P63010 937 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 HSP90AA5PQ58FG0 334 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 GARNL3Q5VVW2 1013 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 IGFL3Q6UXB1 125 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 PRSS58Q8IYP2 241 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 OR4N4Q8N0Y3 316 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 MYO1HQ8N1T3 1032 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 CSNK1A1LQ8N752 337 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 RBMXL3Q8N7X1 1067 aaKnown RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 NAT8LQ8N9F0 302 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 FBXO15Q8NCQ5 510 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 STT3BQ8TCJ2 826 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 ASB11Q8WXH4 323 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 MVB12AQ96EY5 273 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 MMABQ96EY8 250 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 HIST1H2AHQ96KK5 128 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 RUNDC3BQ96NL0 473 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 HIST1H2AJQ99878 128 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 TRIM56Q9BRZ2 755 aaKnown RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 H2AFJQ9BTM1 129 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 TRIM54Q9BYV2 358 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 LHPPQ9H008 270 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 PCBD2Q9H0N5 130 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 ZNF552Q9H707 407 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 GRPEL1Q9HAV7 217 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 CCDC177Q9NQR7 707 aaPredicted RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 AGPAT4Q9NRZ5 378 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 SLC22A11Q9NSA0 550 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 TRMT1Q9NXH9 659 aaKnown RBP9.88□□□□□ -0.83
LINC00564-201ENST00000567258 TRPC4Q9UBN4 977 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 CTSFQ9UBX1 484 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 PCYOX1Q9UHG3 505 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 C3orf18Q9UK00 162 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 SNX12Q9UMY4 172 aa9.88□□□□□ -0.83
LINC00564-201ENST00000567258 PCSK5Q92824 1860 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 DNALI1O14645 258 aaPredicted RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 PCDH17O14917 1159 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 HAUS5O94927 633 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 C8GP07360 202 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 HEXBP07686 556 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 ERGP11308 486 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 GP1BBP13224 206 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 CCND1P24385 295 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 GRK3P35626 688 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 AVPR1BP47901 424 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 UQCRFS1P47985 274 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 FOXL2P58012 376 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 RELAQ04206 551 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 KLC1Q07866 573 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 BBS9Q3SYG4 887 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 PLEKHN1Q494U1 663 aaPredicted RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 SPANXN3Q5MJ09 141 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 FBXO42Q6P3S6 717 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 COX15Q7KZN9 410 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 PAQR7Q86WK9 346 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 ZGRF1Q86YA3 2104 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 CPNE9Q8IYJ1 553 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 PDIK1LQ8N165 341 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 DNAJB14Q8TBM8 379 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 ZNF480Q8WV37 535 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 ALKBH8Q96BT7 664 aaKnown RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 THOC3Q96J01 351 aaKnown RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 CNDP1Q96KN2 507 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 SIGLEC10Q96LC7 697 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 CCDC138Q96M89 665 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 WDR77Q9BQA1 342 aaPredicted RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 AARSD1Q9BTE6 412 aaKnown RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 DRC3Q9H069 523 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 MKKSQ9NPJ1 570 aaPredicted RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 C14orf105Q9NVL8 296 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 HS3ST3B1Q9Y662 390 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 COPG1Q9Y678 874 aaKnown RBP9.87□□□□□ -0.83
LINC00564-201ENST00000567258 SVILO95425 2214 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
LINC00564-201ENST00000567258 NSG1A0A0A6YYJ2 146 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 BLACEA4D250 179 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 VSTM2BA6NLU5 285 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 E7ENX8 843 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 H7BY64 318 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 GFYI3L273 518 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 SOCS6O14544 535 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 ALOX12BO75342 701 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 HPP00738 406 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 MYBL2P10244 700 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 BMP4P12644 408 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 PAFAH1B1P43034 410 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 MAGEA3P43357 314 aa9.86□□□□□ -0.83
LINC00564-201ENST00000567258 EMP2P54851 167 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms