RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CUTCQ9NTM9 273 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 FETUBQ9UGM5 382 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 TCFL5Q9UL49 500 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 POLHQ9Y253 713 aa13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 SMG1Q96Q15 3661 aaKnown RBP13.22□□□□□ -0.29
HERPUD1-210ENST00000565966 LOC105369274A0A096LPK9 316 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 LOC102723532A0A0G2JNH3 316 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 A0A1B0GX78 115 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 HYKKA2RU49 373 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 CDC14CA4D256 554 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 NCF1BA6NI72 391 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 NCF1CA8MVU1 366 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 H0YGG7 62 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 H7BY64 318 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 HAT1O14929 419 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 DSCR3O14972 297 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 SHBGP04278 402 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 EIF2S1P05198 315 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 SNRPAP09012 282 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 FURINP09958 794 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 PIM1P11309 404 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 NCF1P14598 390 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 EZRP15311 586 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 HNMTP50135 292 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 ARF3P61204 181 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 NCF4Q15080 339 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 UGT8Q16880 541 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 NKAIN1Q4KMZ8 207 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 ATP1A1-AS1Q5TC04 95 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 MLIPQ5VWP3 458 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 ADCK2Q7Z695 626 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 KLHDC8AQ8IYD2 350 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 OR4N4Q8N0Y3 316 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 EXD3Q8N9H8 876 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 STAG3L4Q8TBR4 150 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 AENQ8WTP8 325 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 RHBDF1Q96CC6 855 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 PRAP1Q96NZ9 151 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 GPR78Q96P69 363 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 ATOH8Q96SQ7 321 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 HAUS8Q9BT25 410 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 SYNPO2LQ9H987 977 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 IFT80Q9P2H3 777 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 NDOR1Q9UHB4 597 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 RNF112Q9ULX5 631 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.29
HERPUD1-210ENST00000565966 TXNDC9O14530 226 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 TAPBPO15533 448 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 KERAO60938 352 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 KLHL2O95198 593 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 ONECUT2O95948 504 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 SFTPCP11686 197 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 CDH1P12830 882 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 HSD17B3P37058 310 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 SLC6A12P48065 614 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 EMP3P54852 163 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 CSNK1G2P78368 415 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 ACAP2Q15057 778 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 FAM83EQ2M2I3 478 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 CDKL4Q5MAI5 379 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 LGSNQ5TDP6 509 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 TIFABQ6ZNK6 161 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 THOC6Q86W42 341 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 PLD6Q8N2A8 252 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 PDPRQ8NCN5 879 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 RHEBL1Q8TAI7 183 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 THAP4Q8WY91 577 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 RERGQ96A58 199 aaPredicted RBP13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 OR2A5Q96R48 311 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 CCDC77Q9BR77 488 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 TMEM79Q9BSE2 394 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 CD274Q9NZQ7 290 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 PTBP2Q9UKA9 531 aaKnown RBP13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 SLC22A14Q9Y267 594 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 NUP210LQ5VU65 1888 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 SCN2AQ99250 2005 aa13.2□□□□□ -0.3
HERPUD1-210ENST00000565966 RFPL1O75677 317 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 KLF7O75840 302 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 GGT5P36269 586 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 GDF5P43026 501 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 GLRBP48167 497 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 POLE2P56282 527 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 NFKB2Q00653 900 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 IL10RAQ13651 578 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 COL9A2Q14055 689 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 MUM1Q2TAK8 710 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 PRTGQ2VWP7 1150 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 FBXO48Q5FWF7 155 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 SULT1C3Q6IMI6 304 aa13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 MRPL14Q6P1L8 145 aaKnown RBP13.19□□□□□ -0.3
HERPUD1-210ENST00000565966 EMBQ6PCB8 327 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms