RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 WDR77Q9BQA1 342 aaPredicted RBP18.05■□□□□ 0.48
SPSB3-207ENST00000565550 MCMBPQ9BTE3 642 aa18.05■□□□□ 0.48
SPSB3-207ENST00000565550 PHACTR1Q9C0D0 580 aa18.05■□□□□ 0.48
SPSB3-207ENST00000565550 NINJ2Q9NZG7 142 aa18.05■□□□□ 0.48
SPSB3-207ENST00000565550 TRMT6Q9UJA5 497 aaKnown RBP18.05■□□□□ 0.48
SPSB3-207ENST00000565550 NXT1Q9UKK6 140 aaKnown RBP18.05■□□□□ 0.48
SPSB3-207ENST00000565550 COMMD10Q9Y6G5 202 aa18.05■□□□□ 0.48
SPSB3-207ENST00000565550 NBPF19A0A087WUL8 3843 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 LOC105369274A0A096LPK9 316 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 LOC102723532A0A0G2JNH3 316 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 FAM95CA0A1B0GW59 222 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 A0A1W2PPV9 198 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 WIPF3A6NGB9 483 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 FAM159BA6NKW6 160 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 VSTM2BA6NLU5 285 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 ZNF500O60304 480 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-207ENST00000565550 NRP2O60462 931 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 ATP5DP30049 168 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 CCNFP41002 786 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 YBX1P67809 324 aaKnown RBP18.04■□□□□ 0.48
SPSB3-207ENST00000565550 FASTKQ14296 549 aaKnown RBP18.04■□□□□ 0.48
SPSB3-207ENST00000565550 RBBP7Q16576 425 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 KBTBD12Q3ZCT8 623 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 AGAP7PQ5VUJ5 663 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 IRAK1BP1Q5VVH5 260 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 TMEM207Q6UWW9 146 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 GSPT2Q8IYD1 628 aaKnown RBP18.04■□□□□ 0.48
SPSB3-207ENST00000565550 OR4N4Q8N0Y3 316 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 GABPB2Q8TAK5 448 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-207ENST00000565550 MAGEC3Q8TD91 643 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 AGAP4Q96P64 663 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 ZNF304Q9HCX3 659 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 SEMA3GQ9NS98 782 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 STOX2Q9P2F5 926 aaPredicted RBP18.04■□□□□ 0.48
SPSB3-207ENST00000565550 ADAMTS6Q9UKP5 1117 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 NFU1Q9UMS0 254 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 MTO1Q9Y2Z2 717 aaKnown RBP18.04■□□□□ 0.48
SPSB3-207ENST00000565550 KLK4Q9Y5K2 254 aa18.04■□□□□ 0.48
SPSB3-207ENST00000565550 HIVEP3Q5T1R4 2406 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 PSIP1O75475 530 aaKnown RBP18.03■□□□□ 0.48
SPSB3-207ENST00000565550 LDLRP01130 860 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 EIF2S1P05198 315 aaKnown RBP18.03■□□□□ 0.48
SPSB3-207ENST00000565550 COL8A1P27658 744 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 GMPRP36959 345 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 ELOAQ14241 798 aaKnown RBP18.03■□□□□ 0.48
SPSB3-207ENST00000565550 TTLL9Q3SXZ7 439 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 TUBB8Q3ZCM7 444 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 TEX35Q5T0J7 233 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 FAM45BPQ6NSW5 357 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 FBXO42Q6P3S6 717 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 IGFL2Q6UWQ7 119 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 SLC26A11Q86WA9 606 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 CTAGE3PQ8IX95 158 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 OR11G2Q8NGC1 345 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 DNAJB14Q8TBM8 379 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 FAM45AQ8TCE6 357 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 PPP4R1Q8TF05 950 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 MRRFQ96E11 262 aaKnown RBP18.03■□□□□ 0.48
SPSB3-207ENST00000565550 VPS39Q96JC1 886 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 MESP1Q9BRJ9 268 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 ACAT2Q9BWD1 397 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 LHPPQ9H008 270 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 CDC42EP4Q9H3Q1 356 aaKnown RBP18.03■□□□□ 0.48
SPSB3-207ENST00000565550 CAB39LQ9H9S4 337 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 AGPAT4Q9NRZ5 378 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 TAS2R13Q9NYV9 303 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 SPATA7Q9P0W8 599 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 IKZF3Q9UKT9 509 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 NOVA2Q9UNW9 492 aaKnown RBP18.03■□□□□ 0.48
SPSB3-207ENST00000565550 SLC5A6Q9Y289 635 aa18.03■□□□□ 0.48
SPSB3-207ENST00000565550 PRRC2CQ9Y520 2896 aaKnown RBP18.03■□□□□ 0.48
SPSB3-207ENST00000565550 ESPNB1AK53 854 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 CLDN1O95832 211 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 MPC1LP0DKB6 136 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 PDAP1Q13442 181 aaKnown RBP18.02■□□□□ 0.48
SPSB3-207ENST00000565550 RNF44Q7L0R7 432 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 MAMDC2Q7Z304 686 aaPredicted RBP18.02■□□□□ 0.48
SPSB3-207ENST00000565550 CEP97Q8IW35 865 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 PRSS58Q8IYP2 241 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 PPM1NQ8N819 430 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 STT3BQ8TCJ2 826 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 LINGO1Q96FE5 620 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 THOC3Q96J01 351 aaKnown RBP18.02■□□□□ 0.48
SPSB3-207ENST00000565550 VPS50Q96JG6 964 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 FMO2Q99518 471 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 PKP4Q99569 1192 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 DPH7Q9BTV6 452 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 CRB3Q9BUF7 120 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 MTRF1LQ9UGC7 380 aaKnown RBP18.02■□□□□ 0.48
SPSB3-207ENST00000565550 VWA7Q9Y334 891 aa18.02■□□□□ 0.48
SPSB3-207ENST00000565550 HEATR5BQ9P2D3 2071 aa18.02■□□□□ 0.47
SPSB3-207ENST00000565550 NOTCH2Q04721 2471 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 TSPAN12O95859 305 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 GSTA2P09210 222 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 ZGLP1P0C6A0 271 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 CMPK1P30085 196 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 TAS2R39P59534 338 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 OCA2Q04671 838 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 KLC1Q07866 573 aa18.01■□□□□ 0.47
SPSB3-207ENST00000565550 Q0VFX4 171 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms