RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 BBS9Q3SYG4 887 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 RBM20Q5T481 1227 aaKnown RBP18.88■□□□□ 0.61
CLN6-206ENST00000565471 PAQR3Q6TCH7 311 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 NDUFAF7Q7L592 441 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 PLD3Q8IV08 490 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 PDIK1LQ8N165 341 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 MYO1HQ8N1T3 1032 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 SSC4DQ8WTU2 575 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 THAP11Q96EK4 314 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 MESP1Q9BRJ9 268 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 ZNF160Q9HCG1 818 aa18.88■□□□□ 0.61
CLN6-206ENST00000565471 CORO1CQ9ULV4 474 aaPredicted RBP18.88■□□□□ 0.61
CLN6-206ENST00000565471 NOVA2Q9UNW9 492 aaKnown RBP18.88■□□□□ 0.61
CLN6-206ENST00000565471 COPG1Q9Y678 874 aaKnown RBP18.88■□□□□ 0.61
CLN6-206ENST00000565471 A0A0A6YYC8 382 aaPredicted RBP18.87■□□□□ 0.61
CLN6-206ENST00000565471 I3L1I5 382 aaPredicted RBP18.87■□□□□ 0.61
CLN6-206ENST00000565471 CBX6O95503 412 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 COX6A1P12074 109 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 FDXRP22570 491 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 CCND1P24385 295 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 CXCR2P25025 360 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 CDKN2DP55273 166 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 MFAP5Q13361 173 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 NR6A1Q15406 480 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 HIF1AQ16665 826 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 AGTRAPQ6RW13 159 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 ISLR2Q6UXK2 745 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 VN1R4Q7Z5H5 301 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 IGDCC3Q8IVU1 814 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 KBTBD2Q8IY47 623 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 C8orf44Q96CB5 159 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 LRRC39Q96DD0 335 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 LINGO1Q96FE5 620 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 LMF1Q96S06 567 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 YIPF2Q9BWQ6 316 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 CSAG2Q9Y5P2 127 aa18.87■□□□□ 0.61
CLN6-206ENST00000565471 USP9YO00507 2555 aaPredicted RBP18.87■□□□□ 0.61
CLN6-206ENST00000565471 LOC102723996A0A087X1L8 192 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 NSG1A0A0A6YYJ2 146 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 H0YIG0 161 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 FFAR3O14843 346 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 GPR42O15529 346 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 SEMA7AO75326 666 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 HEXBP07686 556 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 TSFMP43897 325 aaKnown RBP18.86■□□□□ 0.61
CLN6-206ENST00000565471 AVPR1BP47901 424 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 GLRBP48167 497 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 CSNK1G2P78368 415 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 EIF2S3LQ2VIR3 472 aaKnown RBP18.86■□□□□ 0.61
CLN6-206ENST00000565471 TEDDM1Q5T9Z0 273 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 B3GNTL1Q67FW5 361 aaPredicted RBP18.86■□□□□ 0.61
CLN6-206ENST00000565471 ZC3H7AQ8IWR0 971 aaKnown RBP18.86■□□□□ 0.61
CLN6-206ENST00000565471 DNAJB14Q8TBM8 379 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 SGPP1Q9BX95 441 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 FAM129AQ9BZQ8 928 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 PLAC1Q9HBJ0 212 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 RIC8BQ9NVN3 520 aa18.86■□□□□ 0.61
CLN6-206ENST00000565471 IGHV1-45A0A0A0MS14 117 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 NSA2O95478 260 aaKnown RBP18.85■□□□□ 0.61
CLN6-206ENST00000565471 TSPAN12O95859 305 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 CYC1P08574 325 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 HIST1H2AGP0C0S8 130 aaPredicted RBP18.85■□□□□ 0.61
CLN6-206ENST00000565471 HIST1H2ADP20671 130 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 ELK3P41970 407 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 IL2P60568 153 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 DR1Q01658 176 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 PDAP1Q13442 181 aaKnown RBP18.85■□□□□ 0.61
CLN6-206ENST00000565471 ZNF169Q14929 603 aaPredicted RBP18.85■□□□□ 0.61
CLN6-206ENST00000565471 TLR1Q15399 786 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 PHKG1Q16816 387 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 STEAP4Q687X5 459 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 HIBCHQ6NVY1 386 aaPredicted RBP18.85■□□□□ 0.61
CLN6-206ENST00000565471 LCTLQ6UWM7 567 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 MBOAT1Q6ZNC8 495 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 C17orf64Q86WR6 236 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 CREG2Q8IUH2 290 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 PRR7Q8TB68 274 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 HIST1H2AHQ96KK5 128 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 HIST1H2AJQ99878 128 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 H2AFJQ9BTM1 129 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 ATG10Q9H0Y0 220 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 AGPAT4Q9NRZ5 378 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 NTNG1Q9Y2I2 539 aa18.85■□□□□ 0.61
CLN6-206ENST00000565471 MRPS2Q9Y399 296 aaKnown RBP18.85■□□□□ 0.61
CLN6-206ENST00000565471 MAST4O15021 2626 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 USP27XA6NNY8 438 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 KLHL18O94889 574 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 BMP10O95393 424 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 DDAH2O95865 285 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 SERPINA7P05543 415 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 PRR35P0CG20 571 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 AP1S2P56377 157 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 EEF1A2Q05639 463 aaKnown RBP18.84■□□□□ 0.61
CLN6-206ENST00000565471 NAE1Q13564 534 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 FRG1Q14331 258 aaKnown RBP18.84■□□□□ 0.61
CLN6-206ENST00000565471 SYT16Q17RD7 645 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 HECTD2Q5U5R9 776 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 CAPN13Q6MZZ7 669 aaPredicted RBP18.84■□□□□ 0.61
CLN6-206ENST00000565471 FAM45BPQ6NSW5 357 aa18.84■□□□□ 0.61
CLN6-206ENST00000565471 TMEM205Q6UW68 189 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms