RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 OPTCQ9UBM4 332 aa15.29■□□□□ 0.04
RAB40C-208ENST00000564703 SEC16AO15027 2179 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 KCNE1BA0A087WTH5 132 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 FEZF1A0PJY2 475 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CCDC151A5D8V7 595 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 OR1F1O43749 312 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 PIM1P11309 404 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-208ENST00000564703 MTHFD2P13995 350 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 EPB42P16452 691 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 TCN2P20062 427 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 RPS15P62841 145 aaKnown RBP15.28■□□□□ 0.04
RAB40C-208ENST00000564703 RBBP5Q15291 538 aaKnown RBP15.28■□□□□ 0.04
RAB40C-208ENST00000564703 HIST2H2ACQ16777 129 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CATSPEREQ5SY80 951 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 HIST2H2AA3Q6FI13 130 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 RHBDD2Q6NTF9 364 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CCDC81Q6ZN84 652 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 TTLL10Q6ZVT0 673 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 LRRC70Q7Z2Q7 622 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CROCCP2Q86T23 111 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 TMPRSS11BQ86T26 416 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 PLD3Q8IV08 490 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CYP4X1Q8N118 509 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 KRT78Q8N1N4 520 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CSNK1A1LQ8N752 337 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CAMKVQ8NCB2 501 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 OR4K1Q8NGD4 311 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 TMEM79Q9BSE2 394 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 GPN2Q9H9Y4 310 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-208ENST00000564703 RRAGDQ9NQL2 400 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-208ENST00000564703 CUTCQ9NTM9 273 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 XPR1Q9UBH6 696 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 KCND3Q9UK17 655 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 GRID1Q9ULK0 1009 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 SH2B3Q9UQQ2 575 aa15.28■□□□□ 0.04
RAB40C-208ENST00000564703 ADAMTS20P59510 1910 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 TRBC2A0A5B9 178 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 K7EPI3 171 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 NRP2O60462 931 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 KATNA1O75449 491 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 ITPKBP27987 946 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 STAT5AP42229 794 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 DCDP81605 110 aaKnown RBP15.27■□□□□ 0.04
RAB40C-208ENST00000564703 MEF2AQ02078 507 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-208ENST00000564703 IRF8Q02556 426 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 SETDB1Q15047 1291 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 NDUFA9Q16795 377 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 MUM1Q2TAK8 710 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 XKR6Q5GH73 641 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 METTL2BQ6P1Q9 378 aaKnown RBP15.27■□□□□ 0.04
RAB40C-208ENST00000564703 DSELQ8IZU8 1212 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 TEX9Q8N6V9 391 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 MFSD9Q8NBP5 474 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 SLC38A9Q8NBW4 561 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 PROKR1Q8TCW9 393 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 SLC13A3Q8WWT9 602 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 PHF21BQ96EK2 531 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 ZNF285Q96NJ3 590 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 C17orf62Q9BQA9 187 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 TMEM109Q9BVC6 243 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 TMEM216Q9P0N5 145 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 DHCR7Q9UBM7 475 aaKnown RBP15.27■□□□□ 0.04
RAB40C-208ENST00000564703 GPN3Q9UHW5 284 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-208ENST00000564703 CDC14AQ9UNH5 594 aa15.27■□□□□ 0.04
RAB40C-208ENST00000564703 MDC1Q14676 2089 aaKnown RBP15.27■□□□□ 0.03
RAB40C-208ENST00000564703 IGF2RP11717 2491 aa15.27■□□□□ 0.03
RAB40C-208ENST00000564703 FITM1A5D6W6 292 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 C9J4A7 227 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 H3BMH7 237 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 COPEO14579 308 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 KLK8O60259 260 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 LCMT2O60294 686 aaKnown RBP15.26■□□□□ 0.03
RAB40C-208ENST00000564703 GLRA3O75311 464 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 SERPIND1P05546 499 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 CTSBP07858 339 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 CD63P08962 238 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 KRT4P19013 534 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 DLSTP36957 453 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 PIK3CGP48736 1102 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 AGTR2P50052 363 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 EMP3P54852 163 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 TMPRSS3P57727 454 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 TLE3Q04726 772 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 GPS2Q13227 327 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 LAPTM5Q13571 262 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 PCBP2Q15366 365 aaKnown RBP eCLIP15.26■□□□□ 0.03
RAB40C-208ENST00000564703 KRT71Q3SY84 523 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 PAGE2BQ5JRK9 111 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 C1orf189Q5VU69 101 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 GARNL3Q5VVW2 1013 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 ATG9BQ674R7 924 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 FAM199XQ6PEV8 388 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-208ENST00000564703 SLCO4C1Q6ZQN7 724 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 VASH2Q86V25 355 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 PTGR2Q8N8N7 351 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-208ENST00000564703 MZB1Q8WU39 189 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 UBTD2Q8WUN7 234 aa15.26■□□□□ 0.03
RAB40C-208ENST00000564703 ATP6V1E2Q96A05 226 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms