RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 SF1Q15637 639 aaKnown RBP18.09■□□□□ 0.49
NME3-207ENST00000564628 PHKG1Q16816 387 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 UBAP2Q5T6F2 1119 aaKnown RBP18.09■□□□□ 0.49
NME3-207ENST00000564628 FCRL6Q6DN72 434 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 CEP97Q8IW35 865 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 CLEC1AQ8NC01 280 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 ENAMQ9NRM1 1142 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 INTS7Q9NVH2 962 aaKnown RBP18.09■□□□□ 0.49
NME3-207ENST00000564628 ASF1BQ9NVP2 202 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 TXNDC16Q9P2K2 825 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 IKZF3Q9UKT9 509 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 SLC5A6Q9Y289 635 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 KLHL20Q9Y2M5 609 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 AP1M2Q9Y6Q5 423 aa18.09■□□□□ 0.49
NME3-207ENST00000564628 TARM1B6A8C7 271 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 OTX2P32243 289 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 GRIA3P42263 894 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 RAPSNQ13702 412 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 ZNF460Q14592 562 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 MYBPC3Q14896 1274 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 SLMAPQ14BN4 828 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 EFTUD2Q15029 972 aaKnown RBP eCLIP18.08■□□□□ 0.486e-11■■■■■ 37.4
NME3-207ENST00000564628 ZKSCAN8Q15776 578 aaPredicted RBP18.08■□□□□ 0.48
NME3-207ENST00000564628 DCAF10Q5QP82 559 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 GRTP1Q5TC63 336 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 ZNF787Q6DD87 383 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 FIGLAQ6QHK4 219 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 CTAGE3PQ8IX95 158 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 GPR135Q8IZ08 494 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 NKAPQ8N5F7 415 aaKnown RBP18.08■□□□□ 0.48
NME3-207ENST00000564628 PPM1NQ8N819 430 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 MCOLN3Q8TDD5 553 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 ZUFSPQ96AP4 578 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 CCDC138Q96M89 665 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 C5orf34Q96MH7 638 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 BARD1Q99728 777 aaKnown RBP18.08■□□□□ 0.48
NME3-207ENST00000564628 CDC42EP4Q9H3Q1 356 aaKnown RBP18.08■□□□□ 0.48
NME3-207ENST00000564628 ACSS3Q9H6R3 686 aa18.08■□□□□ 0.48
NME3-207ENST00000564628 STOX2Q9P2F5 926 aaPredicted RBP18.08■□□□□ 0.48
NME3-207ENST00000564628 IPO13O94829 963 aaKnown RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 SYF2O95926 243 aaKnown RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 ENO2P09104 434 aaPredicted RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 SAT1P21673 171 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 SPRP35270 261 aaPredicted RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 AP1S2P56377 157 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 SOX8P57073 446 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 PPP1R3AQ16821 1122 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 DEFB110Q30KQ9 67 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 CRB2Q5IJ48 1285 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 RHBDD2Q6NTF9 364 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 SUSD1Q6UWL2 747 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 SBSNQ6UWP8 590 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 GALNT16Q8N428 558 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 CISD2Q8N5K1 135 aaKnown RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 PROKR1Q8TCW9 393 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 AENQ8WTP8 325 aaKnown RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 ANKRD49Q8WVL7 239 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 TM9SF4Q92544 642 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 CAVIN3Q969G5 261 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 TSPAN17Q96FV3 270 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 ZNF285Q96NJ3 590 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 MIPEPQ99797 713 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 SLC6A20Q9NP91 592 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 NOVA2Q9UNW9 492 aaKnown RBP18.07■□□□□ 0.48
NME3-207ENST00000564628 PLCL2Q9UPR0 1127 aa18.07■□□□□ 0.48
NME3-207ENST00000564628 CELSR2Q9HCU4 2923 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 IGKV1-8A0A0C4DH67 115 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 OR2A25A4D2G3 310 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 ANKUB1A6NFN9 424 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 PEX12O00623 359 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 FAM155BO75949 473 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 MYBL2P10244 700 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 COL8A1P27658 744 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 PHBP35232 272 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 RPA3P35244 121 aaPredicted RBP18.06■□□□□ 0.48
NME3-207ENST00000564628 FOLR3P41439 243 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 GCGRP47871 477 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 YBX1P67809 324 aaKnown RBP18.06■□□□□ 0.48
NME3-207ENST00000564628 NAA25Q14CX7 972 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 ICE2Q659A1 982 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 MBOAT1Q6ZNC8 495 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 TICAM1Q8IUC6 712 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 PPFIBP2Q8ND30 876 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 OR2Y1Q8NGV0 311 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 GBP5Q96PP8 586 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 CYTH2Q99418 400 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 ILKAPQ9H0C8 392 aaPredicted RBP18.06■□□□□ 0.48
NME3-207ENST00000564628 CAB39LQ9H9S4 337 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 GPAMQ9HCL2 828 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 TAC3Q9UHF0 121 aa18.06■□□□□ 0.48
NME3-207ENST00000564628 CTSVO60911 334 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 OR2B3O76000 313 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 CTSBP07858 339 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 CMPK1P30085 196 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 TBPL1P62380 186 aa18.05■□□□□ 0.48
NME3-207ENST00000564628 PRDX1Q06830 199 aaKnown RBP18.05■□□□□ 0.48
NME3-207ENST00000564628 USP10Q14694 798 aaKnown RBP18.05■□□□□ 0.48
NME3-207ENST00000564628 ZXDCQ2QGD7 858 aaPredicted RBP18.05■□□□□ 0.48
NME3-207ENST00000564628 BEND6Q5SZJ8 279 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms