RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SEMA3DO95025 777 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 FKBP9O95302 570 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 PSMG1O95456 288 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 CTSEP14091 401 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 SDC1P18827 310 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 CMPK1P30085 196 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 GRK3P35626 688 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 RPL3P39023 403 aaKnown RBP14.97□□□□□ -0.01
COMMD4-210ENST00000564587 HNRNPFP52597 415 aaKnown RBP14.97□□□□□ -0.01
COMMD4-210ENST00000564587 RPS13P62277 151 aaKnown RBP14.97□□□□□ -0.01
COMMD4-210ENST00000564587 REEP5Q00765 189 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 SRSF11Q05519 484 aaKnown RBP14.97□□□□□ -0.01
COMMD4-210ENST00000564587 PTGR1Q14914 329 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 KIR2DS5Q14953 304 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 TIGD2Q4W5G0 525 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 PARGQ86W56 976 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 HPS6Q86YV9 775 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 SYT12Q8IV01 421 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 RBM12BQ8IXT5 1001 aaKnown RBP14.97□□□□□ -0.01
COMMD4-210ENST00000564587 SLC13A3Q8WWT9 602 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 LCN9Q8WX39 176 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 SH3GL1Q99961 368 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 CENPKQ9BS16 269 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 MUC13Q9H3R2 512 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 AASDHPPTQ9NRN7 309 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 TMEM184CQ9NVA4 438 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 C2orf42Q9NWW7 574 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 ABCD2Q9UBJ2 740 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 ICKQ9UPZ9 632 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 WBP11Q9Y2W2 641 aaKnown RBP14.97□□□□□ -0.01
COMMD4-210ENST00000564587 SIT1Q9Y3P8 196 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 L3MBTL1Q9Y468 752 aa14.97□□□□□ -0.01
COMMD4-210ENST00000564587 LRP4O75096 1905 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 PLXND1Q9Y4D7 1925 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 FAM221BA6H8Z2 402 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 AXIN1O15169 862 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 KCNH1O95259 989 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 PGRP06401 933 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 XRCC1P18887 633 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 AK4P27144 223 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 S100A3P33764 101 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 AP2B1P63010 937 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 RACK1P63244 317 aaKnown RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 LRRC74AQ0VAA2 488 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 EIF2B5Q13144 721 aaKnown RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 PWP1Q13610 501 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 CEACAM7Q14002 265 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 TRIM25Q14258 630 aaKnown RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 FZD2Q14332 565 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 MAPKAPK3Q16644 382 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 IYDQ6PHW0 289 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 SLC30A9Q6PML9 568 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 LAYNQ6UX15 382 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 PACS2Q86VP3 889 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 AMIGO1Q86WK6 493 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 TRIM48Q8IWZ4 208 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 SLC22A18ASQ8N1D0 253 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 LINC01555Q8NAE3 123 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 OR2A1Q8NGT9 310 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 RLN3Q8WXF3 142 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 VPS33AQ96AX1 596 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 ASB9Q96DX5 294 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 C11orf24Q96F05 449 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 QRFPRQ96P65 431 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 PRPF18Q99633 342 aaKnown RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 ORAI3Q9BRQ5 295 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 ACAT2Q9BWD1 397 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 MRPS30Q9NP92 439 aaKnown RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 POT1Q9NUX5 634 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 SCHIP1Q9P0W5 487 aaPredicted RBP14.96□□□□□ -0.01
COMMD4-210ENST00000564587 SH2B3Q9UQQ2 575 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 DLGAP4Q9Y2H0 992 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 PCDHGA2Q9Y5H1 932 aa14.96□□□□□ -0.01
COMMD4-210ENST00000564587 TRBC2A0A5B9 178 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 PRICKLE3O43900 615 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 ERN1O75460 977 aaKnown RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 BCAS2O75934 225 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 VIPP01282 170 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 HSD17B1P14061 328 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 DDX5P17844 614 aaKnown RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 CD38P28907 300 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 HOXA6P31267 233 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 TIA1P31483 386 aaKnown RBP eCLIP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 GSTM5P46439 218 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 SLC7A2P52569 658 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 EEFSECP57772 596 aaKnown RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 BNIP2Q12982 314 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 MTAPQ13126 283 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 FLOT2Q14254 428 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 KIR2DS3Q14952 304 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 RBBP5Q15291 538 aaKnown RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 FAM174BQ3ZCQ3 159 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 DHDDSQ86SQ9 333 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 NRROSQ86YC3 692 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 RIMKLAQ8IXN7 391 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 METTL4Q8N3J2 472 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 SDR16C5Q8N3Y7 309 aa14.95□□□□□ -0.02
COMMD4-210ENST00000564587 C2orf73Q8N5S3 287 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 C1orf52Q8N6N3 182 aaKnown RBP14.95□□□□□ -0.02
COMMD4-210ENST00000564587 CCDC124Q96CT7 223 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms