RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 HPRP00739 348 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 SGCGQ13326 291 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 OPCMLQ14982 345 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 CFAP58Q5T655 872 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 ERMARDQ5T6L9 678 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 WDR78Q5VTH9 848 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 KRT39Q6A163 491 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 OR4C11Q6IEV9 310 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 CTR9Q6PD62 1173 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 BRINP3Q76B58 766 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 SLC47A2Q86VL8 602 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 ZFAND4Q86XD8 727 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 LINC00612Q8N6U2 182 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 POM121L12Q8N7R1 296 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 LRTM2Q8N967 370 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 OR5T2Q8NGG2 359 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 ROBO4Q8WZ75 1007 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 PDLIM5Q96HC4 596 aaKnown RBP3.88□□□□□ -1.79
UBR1-205ENST00000564540 KLHL5Q96PQ7 755 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 ZNF577Q9BSK1 485 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 PI4K2AQ9BTU6 479 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 EGLN3Q9H6Z9 239 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 TXNDC16Q9P2K2 825 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 PRDM4Q9UKN5 801 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 PA2G4Q9UQ80 394 aaKnown RBP3.88□□□□□ -1.79
UBR1-205ENST00000564540 SELENOKQ9Y6D0 94 aa3.88□□□□□ -1.79
UBR1-205ENST00000564540 TRAV24A0A0B4J272 114 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 MTMR11A4FU01 709 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 K7ENM7 598 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 TFECO14948 347 aaPredicted RBP3.87□□□□□ -1.79
UBR1-205ENST00000564540 ADRB2P07550 413 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 AKR1B1P15121 316 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 CAPZA2P47755 286 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 LIMK1P53667 647 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 LIMK2P53671 638 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 DCDC1P59894 354 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 RBPJQ06330 500 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 LCLAT1Q6UWP7 414 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 SLC24A5Q71RS6 500 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 TLK2Q86UE8 772 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 ABHD12Q8N2K0 398 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 RYBPQ8N488 228 aaPredicted RBP3.87□□□□□ -1.79
UBR1-205ENST00000564540 LGMNQ99538 433 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 UBA5Q9GZZ9 404 aa3.87□□□□□ -1.79
UBR1-205ENST00000564540 MTHFD2LQ9H903 347 aaPredicted RBP3.87□□□□□ -1.79
UBR1-205ENST00000564540 FAM120CQ9NX05 1096 aaKnown RBP3.87□□□□□ -1.79
UBR1-205ENST00000564540 GLTPD2A6NH11 291 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 ACOD1A6NK06 481 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 SHISA7A6NL88 538 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 DIAPH2O60879 1101 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 OXTRP30559 389 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 PTGER3P43115 390 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 CLCN4P51793 760 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 DHODHQ02127 395 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 ARMC4Q5T2S8 1044 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 RBPMS2Q6ZRY4 209 aaKnown RBP3.86□□□□□ -1.79
UBR1-205ENST00000564540 PRPF39Q86UA1 669 aaKnown RBP3.86□□□□□ -1.79
UBR1-205ENST00000564540 GPC2Q8N158 579 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 FBXL16Q8N461 479 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 TSACCQ96A04 125 aaPredicted RBP3.86□□□□□ -1.79
UBR1-205ENST00000564540 SPSB1Q96BD6 273 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 CDCA3Q99618 268 aaPredicted RBP3.86□□□□□ -1.79
UBR1-205ENST00000564540 PUS3Q9BZE2 481 aaKnown RBP3.86□□□□□ -1.79
UBR1-205ENST00000564540 PRR34Q9NV39 138 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 WDR35Q9P2L0 1181 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 CTSZQ9UBR2 303 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 LNPEPQ9UIQ6 1025 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 ELF5Q9UKW6 265 aaPredicted RBP3.86□□□□□ -1.79
UBR1-205ENST00000564540 RARRES3Q9UL19 164 aa3.86□□□□□ -1.79
UBR1-205ENST00000564540 K7EQD1 137 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 SNAP91O60641 907 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 POP4O95707 220 aaKnown RBP3.85□□□□□ -1.79
UBR1-205ENST00000564540 SERPING1P05155 500 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 ACHEP22303 614 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 CPT2P23786 658 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 EEF1B2P24534 225 aaKnown RBP3.85□□□□□ -1.79
UBR1-205ENST00000564540 ETV5P41161 510 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 SRSF9Q13242 221 aaKnown RBP eCLIP3.85□□□□□ -1.79
UBR1-205ENST00000564540 CRY2Q49AN0 593 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 LACTB2Q53H82 288 aaPredicted RBP3.85□□□□□ -1.79
UBR1-205ENST00000564540 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 FAM131BQ86XD5 332 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 HPS6Q86YV9 775 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 RCOR2Q8IZ40 523 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 MAML2Q8IZL2 1156 aaPredicted RBP3.85□□□□□ -1.79
UBR1-205ENST00000564540 TDRD5Q8NAT2 981 aaKnown RBP3.85□□□□□ -1.79
UBR1-205ENST00000564540 XXYLT1Q8NBI6 393 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 LRRC3BQ96PB8 259 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 BTBD9Q96Q07 612 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 NDNQ99608 321 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 DNAI2Q9GZS0 605 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 PARLQ9H300 379 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 BAIAP2L1Q9UHR4 511 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 TP53TG3Q9ULZ0 132 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 ADAMTS9Q9P2N4 1935 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 HCFC1P51610 2035 aa3.85□□□□□ -1.79
UBR1-205ENST00000564540 IGHV4-30-2A0A087WSY4 118 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.84□□□□□ -1.79
UBR1-205ENST00000564540 IGKV6D-41A0A0C4DH26 115 aa3.84□□□□□ -1.79
UBR1-205ENST00000564540 SURF4O15260 269 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms