RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TDRD6O60522 2096 aaKnown RBP12.42□□□□□ -0.42
SPG7-209ENST00000564047 IGSF10Q6WRI0 2623 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 ADAMTS9Q9P2N4 1935 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 KCNE1BA0A087WTH5 132 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CFAP73A6NFT4 308 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 H0YHG0 523 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 DUX1O43812 170 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CRCPO75575 148 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CAPN1P07384 714 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 UROSP10746 265 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CKMT2P17540 419 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CXCR2P25025 360 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CCR8P51685 355 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 OR1D5P58170 312 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 YBX1P67809 324 aaKnown RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 SPDYAQ5MJ70 313 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 PERM1Q5SV97 790 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 KIAA1614Q5VZ46 1190 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 EFL1Q7Z2Z2 1120 aaKnown RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 SPRED1Q7Z699 444 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 FAM129CQ86XR2 697 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 MYLK4Q86YV6 388 aaPredicted RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 NAXDQ8IW45 347 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CDYL2Q8N8U2 506 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 DCBLD1Q8N8Z6 715 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 OR4K1Q8NGD4 311 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 METTL6Q8TCB7 284 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 AGR3Q8TD06 166 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 GATA6Q92908 595 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CNDP2Q96KP4 475 aaKnown RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 CD180Q99467 661 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 SCNM1Q9BWG6 230 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 HELZ2Q9BYK8 2649 aaKnown RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 PITHD1Q9GZP4 211 aaPredicted RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 ABCG4Q9H172 646 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 CUEDC1Q9NWM3 386 aaPredicted RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 ANKMY1Q9P2S6 941 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 VTI1BQ9UEU0 232 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 SNX7Q9UNH6 387 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 KLK4Q9Y5K2 254 aa12.41□□□□□ -0.42
SPG7-209ENST00000564047 ARHGEF17Q96PE2 2063 aaPredicted RBP12.41□□□□□ -0.42
SPG7-209ENST00000564047 KNL1Q8NG31 2342 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 IGKV1-8A0A0C4DH67 115 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 A0A0J9YY10 115 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 C4orf47A7E2U8 309 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 H0YIV9 168 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 H7BY64 318 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 TAF4O00268 1085 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 HDAC3O15379 428 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 CAPN5O15484 640 aaPredicted RBP12.4□□□□□ -0.42
SPG7-209ENST00000564047 TNFSF14O43557 240 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 CHEK2O96017 543 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPG7-209ENST00000564047 KITP10721 976 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 CD22P20273 847 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
SPG7-209ENST00000564047 CD1CP29017 333 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 HMOX2P30519 316 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 GRIA3P42263 894 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 FOXA1P55317 472 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 CSNK1G2P78368 415 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 ZNF33BQ06732 778 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 SLBPQ14493 270 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPG7-209ENST00000564047 CLPPQ16740 277 aaPredicted RBP12.4□□□□□ -0.42
SPG7-209ENST00000564047 HIST2H2ACQ16777 129 aaPredicted RBP12.4□□□□□ -0.42
SPG7-209ENST00000564047 UGT3A2Q3SY77 523 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 CLEC6AQ6EIG7 209 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 HIST2H2AA3Q6FI13 130 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 ZNF425Q6IV72 752 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 MED27Q6P2C8 311 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 KRT78Q8N1N4 520 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 Q8N9G6 341 aaPredicted RBP12.4□□□□□ -0.42
SPG7-209ENST00000564047 IFI44Q8TCB0 444 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 NCSTNQ92542 709 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 UBE2E3Q969T4 207 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 ZUFSPQ96AP4 578 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 ZDHHC12Q96GR4 267 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 PRAP1Q96NZ9 151 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 KCNA7Q96RP8 456 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 AIF1LQ9BQI0 150 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 CCDC3Q9BQI4 270 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 SIKE1Q9BRV8 207 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 DPH7Q9BTV6 452 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 TRIM55Q9BYV6 548 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 NT5DC2Q9H857 520 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 SLC6A20Q9NP91 592 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 GEMIN8Q9NWZ8 242 aaKnown RBP12.4□□□□□ -0.42
SPG7-209ENST00000564047 FTSJ1Q9UET6 329 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 MARCOQ9UEW3 520 aaPredicted RBP12.4□□□□□ -0.42
SPG7-209ENST00000564047 SNX6Q9UNH7 406 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 TIMM22Q9Y584 194 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 PCDHGA11Q9Y5H2 935 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 DNAJC15Q9Y5T4 150 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 USH1CQ9Y6N9 552 aa12.4□□□□□ -0.42
SPG7-209ENST00000564047 OR2A25A4D2G3 310 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 PCNX2A6NKB5 2137 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 TMEM233B4DJY2 109 aa12.39□□□□□ -0.43
SPG7-209ENST00000564047 SH3BP5O60239 455 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms