RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 NME2P22392 152 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 PLOD1Q02809 727 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CMPK2Q5EBM0 449 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 LRRC8BQ6P9F7 803 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CPEB2Q7Z5Q1 589 aaKnown RBP9.76□□□□□ -0.85
SF3B3-204ENST00000563739 PLD3Q8IV08 490 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CCDC71Q8IV32 467 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CSNK1A1LQ8N752 337 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 LILRB4Q8NHJ6 448 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 FAM57AQ8TBR7 257 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 ANP32BQ92688 251 aaKnown RBP9.76□□□□□ -0.85
SF3B3-204ENST00000563739 MMABQ96EY8 250 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CABS1Q96KC9 395 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CYTH2Q99418 400 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 ACAT2Q9BWD1 397 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 CARD6Q9BX69 1037 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 FEZ2Q9UHY8 353 aaPredicted RBP9.76□□□□□ -0.85
SF3B3-204ENST00000563739 L3MBTL1Q9Y468 752 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 ATRQ13535 2644 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 TLN2Q9Y4G6 2542 aa9.76□□□□□ -0.85
SF3B3-204ENST00000563739 SOWAHDA6NJG2 315 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 A8MUI8 341 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 ARHGEF33A8MVX0 844 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 KIAA1324LA8MWY0 1029 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-204ENST00000563739 HAT1O14929 419 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 DRD2P14416 443 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 ABOP16442 354 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 CXCR2P25025 360 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 EEF1DP29692 281 aaKnown RBP9.75□□□□□ -0.85
SF3B3-204ENST00000563739 PTPN7P35236 360 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 GRIA1P42261 906 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 RHAGQ02094 409 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-204ENST00000563739 BTBD16Q32M84 506 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 CTSL3PQ5NE16 218 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 SUSD1Q6UWL2 747 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 CEP128Q6ZU80 1094 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 PDSS2Q86YH6 399 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 CDKL3Q8IVW4 592 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-204ENST00000563739 LRRC56Q8IYG6 542 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-204ENST00000563739 KIF2BQ8N4N8 673 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 OR9A4Q8NGU2 314 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 SUN3Q8TAQ9 357 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 CA5BP1Q8WTZ4 195 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 TSLPQ969D9 159 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 SEC16BQ96JE7 1060 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 TRIM45Q9H8W5 580 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-204ENST00000563739 MMP25Q9NPA2 562 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 LANCL2Q9NS86 450 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 ABHD10Q9NUJ1 306 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 KCNN3Q9UGI6 736 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 GNPTGQ9UJJ9 305 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 NCKAP5O14513 1909 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 ARHGAP21Q5T5U3 1957 aa9.75□□□□□ -0.85
SF3B3-204ENST00000563739 A0A1B0GTH9 108 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 KLK8O60259 260 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 DNAJB6O75190 326 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 CTAG2O75638 210 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 TSPAN12O95859 305 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 RFC3P40938 356 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 NUP107P57740 925 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 EIF3EP60228 445 aaKnown RBP9.74□□□□□ -0.85
SF3B3-204ENST00000563739 ADAM8P78325 824 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 CEBPEQ15744 281 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 TSTD2Q5T7W7 516 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 GARNL3Q5VVW2 1013 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 SLC25A25Q6KCM7 469 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 TMEM200AQ86VY9 491 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 CNGA4Q8IV77 575 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 RCOR2Q8IZ40 523 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 OR8K1Q8NGG5 319 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 OR52K1Q8NGK4 314 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 ELP5Q8TE02 316 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 ALG3Q92685 438 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 NINJ1Q92982 152 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 ARSGQ96EG1 525 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 ZNF354BQ96LW1 612 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 OLFM1Q99784 485 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 MACROD1Q9BQ69 325 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 RAB11FIP5Q9BXF6 653 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 DRC3Q9H069 523 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 OCEL1Q9H607 264 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 SPATA7Q9P0W8 599 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 GALPQ9UBC7 116 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 ST6GALNAC2Q9UJ37 374 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 KIAA1549Q9HCM3 1950 aa9.74□□□□□ -0.85
SF3B3-204ENST00000563739 AKR1B15C9JRZ8 316 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-204ENST00000563739 PROM1O43490 865 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 KDM1AO60341 852 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 SLC25A12O75746 678 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 MATN4O95460 622 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 TPOP07202 933 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 UQCRHP07919 91 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 ICAM2P13598 275 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 ZNF24P17028 368 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 ARNTP27540 789 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 TPP2P29144 1249 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-204ENST00000563739 CHRNB4P30926 498 aa9.73□□□□□ -0.85
SF3B3-204ENST00000563739 CTNNA1P35221 906 aaKnown RBP9.73□□□□□ -0.85
SF3B3-204ENST00000563739 LTBQ06643 244 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms