RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ZFPL1O95159 310 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 KRT14P02533 472 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 UBTFL6P0CB48 400 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 ODC1P11926 461 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 PAICSP22234 425 aaKnown RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC8A1P32418 973 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 LIPAP38571 399 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CETN2P41208 172 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF75DP51815 510 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 JAK3P52333 1124 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ATP5IP56385 69 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 HSD11B2P80365 405 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 HGFACQ04756 655 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 TGM3Q08188 693 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CUL1Q13616 776 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 C6orf141Q5SZD1 244 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ARMC12Q5T9G4 340 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 TAF3Q5VWG9 929 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CCDC80Q76M96 950 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 NANOGNBQ7Z5D8 188 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 TECPR1Q7Z6L1 1165 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF589Q86UQ0 364 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 SYT12Q8IV01 421 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC35F3Q8IY50 421 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 KLHDC8AQ8IYD2 350 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 LAS2Q8IYD9 372 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 LRRC56Q8IYG6 542 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 APCDD1Q8J025 514 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 STKLD1Q8NE28 680 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ATP8B4Q8TF62 1192 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 DNAJA4Q8WW22 397 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 FCGR1BQ92637 280 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 KIAA1143Q96AT1 154 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 RASD2Q96D21 266 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 R3HDM4Q96D70 268 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 SPDL1Q96EA4 605 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 DYNLL2Q96FJ2 89 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 OXNAD1Q96HP4 312 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 C4orf36Q96KX1 117 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 FEVQ99581 238 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ZSWIM1Q9BR11 485 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 LLPHQ9BRT6 129 aaKnown RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 FAM213AQ9BRX8 229 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 MAGEF1Q9HAY2 307 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 VAT1LQ9HCJ6 419 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CHMP1AQ9HD42 196 aaPredicted RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 C6orf50Q9HD87 102 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 BPIFA1Q9NP55 256 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 MYNNQ9NPC7 610 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 RNF186Q9NXI6 227 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 QPCTLQ9NXS2 382 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 TBC1D7Q9P0N9 293 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 KLHL9Q9P2J3 617 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 CARD8Q9Y2G2 431 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ATP6V1DQ9Y5K8 247 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 DDX49Q9Y6V7 483 aaKnown RBP5□□□□□ -1.61
VPS35P1-201ENST00000563400 ABCB11O95342 1321 aa5□□□□□ -1.61
VPS35P1-201ENST00000563400 ECM29Q5VYK3 1845 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 TRPM7Q96QT4 1865 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 A0A1B0GTQ1 180 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 BTBD17A6NE02 478 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC15A5A6NIM6 579 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 HSPB2A8KAH6 182 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 MCIDASD6RGH6 385 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 NPIPB6E9PJ23 425 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 AP4M1O00189 453 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 AKR7A2O43488 359 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 CNTN5O94779 1100 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 DEXIO95424 95 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 ICAM1P05362 532 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 PABPC4LP0CB38 370 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SPP1P10451 314 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 KRT3P12035 628 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 GCFC2P16383 781 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 CD22P20273 847 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 PRKACBP22694 351 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 EEF1B2P24534 225 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 CDC25AP30304 524 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 RGS7P49802 495 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 ANXA11P50995 505 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SUCLG1P53597 346 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 MRPS34P82930 218 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SRSF3P84103 164 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 PRKAA1Q13131 559 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 HSPB2Q16082 182 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SGO1Q5FBB7 561 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 C10orf120Q5SQS8 335 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 PHYHD1Q5SRE7 291 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM63BQ5T3F8 832 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 LRRC38Q5VT99 294 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 C18orf63Q68DL7 685 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 FIGLAQ6QHK4 219 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 EFL1Q7Z2Z2 1120 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 CTU1Q7Z7A3 348 aaKnown RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 CDR2LQ86X02 465 aaPredicted RBP4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 CD302Q8IX05 232 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 PALM2Q8IXS6 379 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 ADGRG5Q8IZF4 528 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 OFCC1Q8IZS5 231 aa4.99□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC22A8Q8TCC7 542 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms