RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 AKIRIN1Q9H9L7 192 aaPredicted RBP2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 RNPEPL1Q9HAU8 725 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 DNAJC11Q9NVH1 559 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 TMOD3Q9NYL9 352 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC7A7Q9UM01 511 aa2.97□□□□□ -1.93
SHCBP1-202ENST00000563219 GREB1LQ9C091 1923 aaPredicted RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 A0A1W2PN81 502 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 CASTOR2A6NHX0 329 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 E5RGE8 158 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM72CH0Y354 149 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SLC22A2O15244 555 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SNX3O60493 162 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SOCS5O75159 536 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 B3GALNT1O75752 331 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 ATP6AP2O75787 350 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 DDHD2O94830 711 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 NR3C1P04150 777 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 PRSS1P07477 247 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SP9P0CG40 484 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 C8orf89P0DMQ9 161 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 DARSP14868 501 aaKnown RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 CHRNA7P36544 502 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 CASP3P42574 277 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 FRKP42685 505 aaPredicted RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 RPL21P46778 160 aaKnown RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SERPINH1P50454 418 aaKnown RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 KIAA1024LP59773 190 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 HILS1P60008 231 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 GCNT1Q02742 428 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 ILF2Q12905 390 aaKnown RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 TAF10Q12962 218 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SQLEQ14534 574 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 RPS6KA1Q15418 735 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 TWISTNBQ3B726 338 aaPredicted RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 ITPRIPL2Q3MIP1 535 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 PARP10Q53GL7 1025 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 DCAF10Q5QP82 559 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM72AQ5TYM5 149 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SLC35E4Q6ICL7 350 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM166AQ6J272 317 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM72DQ6L9T8 149 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 TATDN1Q6P1N9 297 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SIGLEC15Q6ZMC9 328 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 FAM72BQ86X60 149 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 C4orf19Q8IY42 314 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 RASGEF1AQ8N9B8 481 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 OR10Q1Q8NGQ4 319 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 OR1J1Q8NGS3 322 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 LRRC8CQ8TDW0 803 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 GRHL3Q8TE85 626 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 FCAMRQ8WWV6 532 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 HSD17B8Q92506 261 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 TM9SF4Q92544 642 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 PRCCQ92733 491 aaPredicted RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 DHX58Q96C10 678 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF524Q96C55 264 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 PGLYRP2Q96PD5 576 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 RTP3Q9BQQ7 232 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 Q9H8V8 135 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 GSN-AS1Q9NRJ2 163 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 SPG21Q9NZD8 308 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF624Q9P2J8 865 aaPredicted RBP2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 GPR132Q9UNW8 380 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 TCF19Q9Y242 345 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 CHKBQ9Y259 395 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 NSG2Q9Y328 171 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 TRIM17Q9Y577 477 aa2.96□□□□□ -1.94
SHCBP1-202ENST00000563219 A0A0B4J203 849 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 C13orf42A0A1B0GVH6 325 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 ANKRD61A6NGH8 418 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 H3BMM5 538 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 FPGTO14772 594 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 ATP9AO75110 1047 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 GMNNO75496 209 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CALCAP01258 141 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 SP1P08047 785 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CPA3P15088 417 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 GOT1P17174 413 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 VCLP18206 1134 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CDH3P22223 829 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 HPDP32754 393 aaPredicted RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CDKN1AP38936 164 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 RABIFP47224 123 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CASP9P55211 416 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 UCP2P55851 309 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 LINC01547P58512 204 aaPredicted RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 B3GALT5-AS1P59052 145 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 AKAP17AQ02040 695 aaKnown RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 LGALS3BPQ08380 585 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 SMC1AQ14683 1233 aaKnown RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 PDK1Q15118 436 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 ODF4Q2M2E3 257 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 AARDQ4LEZ3 155 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 SUSD4Q5VX71 490 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 CTR9Q6PD62 1173 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 RABEPKQ7Z6M1 372 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF554Q86TJ5 538 aa2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 TRPT1Q86TN4 253 aaKnown RBP2.95□□□□□ -1.94
SHCBP1-202ENST00000563219 NUDT13Q86X67 352 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms