RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 HIST2H2AA3Q6FI13 130 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 CEACAM20Q6UY09 585 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 PPP1R3BQ86XI6 285 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MYLK4Q86YV6 388 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MCATQ8IVS2 390 aaKnown RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 GPR135Q8IZ08 494 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 PPP1R14CQ8TAE6 165 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MGARPQ8TDB4 240 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 UBE2E3Q969T4 207 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 THAP11Q96EK4 314 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 WDR34Q96EX3 536 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MAGEB10Q96LZ2 347 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 NSUN5Q96P11 429 aaKnown RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 TAAR9Q96RI9 348 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 PAIP2Q9BPZ3 127 aaKnown RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MECRQ9BV79 373 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 NRSN2Q9GZP1 204 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 PITHD1Q9GZP4 211 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 NOL11Q9H8H0 719 aaKnown RBP18.03■□□□□ 0.48
RAB40C-207ENST00000563109 PRM3Q9NNZ6 103 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 MED4Q9NPJ6 270 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 SERTAD3Q9UJW9 196 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 PILRAQ9UKJ1 303 aa18.03■□□□□ 0.48
RAB40C-207ENST00000563109 FEZF1A0PJY2 475 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 BIRC5O15392 142 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 OR1F1O43749 312 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 UGDHO60701 494 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 SPINK2P20155 84 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 RBMS1P29558 406 aaKnown RBP18.02■□□□□ 0.48
RAB40C-207ENST00000563109 ITGA1P56199 1179 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 DOC2AQ14183 400 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 TCTE1Q5JU00 501 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 LIPJQ5W064 366 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 PLD3Q8IV08 490 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 NUDCD3Q8IVD9 361 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 TRPC4APQ8TEL6 797 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 ZNF501Q96CX3 271 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-207ENST00000563109 TEFMQ96QE5 360 aaKnown RBP18.02■□□□□ 0.48
RAB40C-207ENST00000563109 ZPBPQ9BS86 351 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 DDA1Q9BW61 102 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 NLNQ9BYT8 704 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 ASPSCR1Q9BZE9 553 aa18.02■□□□□ 0.48
RAB40C-207ENST00000563109 GEMIN8Q9NWZ8 242 aaKnown RBP18.02■□□□□ 0.48
RAB40C-207ENST00000563109 A0A1W2PNU3 283 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-207ENST00000563109 OR7A17O14581 309 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 SRPX2O60687 465 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-207ENST00000563109 OR2B3O76000 313 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 TNFSF15O95150 251 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 CLDN9O95484 217 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 FGF5P12034 268 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 ETV5P41161 510 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 BCL6P41182 706 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 HNF4AP41235 474 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 CASP2P42575 452 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 GABRA4P48169 554 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 CDH13P55290 713 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 VSX2P58304 361 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-207ENST00000563109 PCDH1Q08174 1060 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 LCP2Q13094 533 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 MPP2Q14168 576 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 RBBP5Q15291 538 aaKnown RBP18.01■□□□□ 0.47
RAB40C-207ENST00000563109 GRHL2Q6ISB3 625 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 FRMD7Q6ZUT3 714 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 RPS27LQ71UM5 84 aaKnown RBP18.01■□□□□ 0.47
RAB40C-207ENST00000563109 ERMP1Q7Z2K6 904 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 LSMEM2Q8N112 164 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 ZNF655Q8N720 491 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-207ENST00000563109 MFSD9Q8NBP5 474 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 TTLQ8NG68 377 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 FCRL4Q96PJ5 515 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 CTRCQ99895 268 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 NTMT1Q9BV86 223 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 GSTO2Q9H4Y5 243 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 MLXIPLQ9NP71 852 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 ACSS2Q9NR19 701 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 WASF3Q9UPY6 502 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 MSRB2Q9Y3D2 182 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 AK5Q9Y6K8 562 aa18.01■□□□□ 0.47
RAB40C-207ENST00000563109 WDR91A4D1P6 747 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 PMS2P1A4D2B8 440 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 H0YGG7 62 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 TXNDC9O14530 226 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 EIF2S1P05198 315 aaKnown RBP18■□□□□ 0.47
RAB40C-207ENST00000563109 DHRS4L1P0CG22 281 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 TSPAN8P19075 237 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 GSTM2P28161 218 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 SCTRP47872 440 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 ARF3P61204 181 aaPredicted RBP18■□□□□ 0.47
RAB40C-207ENST00000563109 PPP2R2AP63151 447 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 LARP7Q4G0J3 582 aaKnown RBP eCLIP18■□□□□ 0.47
RAB40C-207ENST00000563109 FRMPD2BQ6IN97 320 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 MED27Q6P2C8 311 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 FBXO42Q6P3S6 717 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 TMIGD1Q6UXZ0 262 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 GPRIN3Q6ZVF9 776 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 MILR1Q7Z6M3 343 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 TMEM126BQ8IUX1 230 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 CSNK1A1LQ8N752 337 aa18■□□□□ 0.47
RAB40C-207ENST00000563109 TTC29Q8NA56 475 aaPredicted RBP18■□□□□ 0.47
RAB40C-207ENST00000563109 OR52B6Q8NGF0 335 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms