RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TSSK1BQ9BXA7 367 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 UCK2Q9BZX2 261 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 LACRTQ9GZZ8 138 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 DRC3Q9H069 523 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 P2RY12Q9H244 342 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 ANAPC5Q9UJX4 755 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 PPT2Q9UMR5 302 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 CRYL1Q9Y2S2 319 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 REXO2Q9Y3B8 237 aaKnown RBP11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 PHF3Q92576 2039 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 PRMT5O14744 637 aaPredicted RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 TTI1O43156 1089 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 CDC40O60508 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 RDH16O75452 317 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 NDUFS3O75489 264 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 EEF1DP29692 281 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 PTPN7P35236 360 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 XCR1P46094 333 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 ART1P52961 327 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 TBX2Q13207 712 aaPredicted RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 CUL1Q13616 776 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 SNTB1Q13884 538 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 KCNJ11Q14654 390 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 SPA17Q15506 151 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 MAPKAPK3Q16644 382 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 LONRF1Q17RB8 773 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 P3H1Q32P28 736 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 MTFR2Q6P444 385 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 TMEM205Q6UW68 189 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 CPEB2Q7Z5Q1 589 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 ANKRD37Q7Z713 158 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 DOLPP1Q86YN1 238 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 RPRMLQ8N4K4 120 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 RAB42Q8N4Z0 105 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 MDS2Q8NDY4 140 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 PPHLN1Q8NEY8 458 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 METTL21AQ8WXB1 218 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 RERGQ96A58 199 aaPredicted RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 POM121Q96HA1 1249 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 FRMD6Q96NE9 622 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 PPP1R2P1Q96PQ5 205 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 CYTH2Q99418 400 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 SLC30A3Q99726 388 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 C19orf43Q9BQ61 176 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 TUBB6Q9BUF5 446 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 RAB11FIP5Q9BXF6 653 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 MKKSQ9NPJ1 570 aaPredicted RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 RAB6BQ9NRW1 208 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 C14orf105Q9NVL8 296 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 GNPTGQ9UJJ9 305 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 SH2B3Q9UQQ2 575 aa11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 ANKHD1Q8IWZ3 2542 aaKnown RBP11.03□□□□□ -0.64
NSMCE1-202ENST00000561960 FLNAP21333 2647 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 LOC102723996A0A087X1L8 192 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 FEZF1A0PJY2 475 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 GABRR3A8MPY1 467 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 ADAM10O14672 748 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 DNAJB6O75190 326 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 VPS26AO75436 327 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 PDE9AO76083 593 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 GAS8O95995 478 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 APRTP07741 180 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 FDXRP22570 491 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 ADRA1DP25100 572 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 PSMA3P25788 255 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 OLR1P78380 273 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 THEMIS2Q5TEJ8 643 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 ICE2Q659A1 982 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 RIPOR1Q6ZS17 1223 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 LINC00523Q86TU6 105 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 TMEM200AQ86VY9 491 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 CHERPQ8IWX8 916 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 MARVELD2Q8N4S9 558 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 ARHGEF39Q8N4T4 335 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 OR5T3Q8NGG3 340 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 OR9A1PQ8NGU1 263 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 SLC35B2Q8TB61 432 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 CA5BP1Q8WTZ4 195 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 ALKBH8Q96BT7 664 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 FOPNLQ96NB1 174 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 OR2A5Q96R48 311 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 UTP23Q9BRU9 249 aaKnown RBP11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 TRIM51Q9BSJ1 452 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 CDCP1Q9H5V8 836 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 MCCC2Q9HCC0 563 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 CDC14AQ9UNH5 594 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.65
NSMCE1-202ENST00000561960 NCKAP5O14513 1909 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 GOLGA6L9A6NEM1 432 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 A8MUA0 341 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 H7BY64 318 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 SMAPO00193 183 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 ASNA1O43681 348 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 SLC16A8O95907 504 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 CETN2P41208 172 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 PNLIPRP1P54315 467 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 ACVR1Q04771 509 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 HYAL2Q12891 473 aa11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 KLF1Q13351 362 aaPredicted RBP11.01□□□□□ -0.65
NSMCE1-202ENST00000561960 KLHL38Q2WGJ6 581 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 210.1 ms