RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 B3GNTL1Q67FW5 361 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 LAIR1Q6GTX8 287 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GAGE2AQ6NT46 116 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TTC27Q6P3X3 843 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CLEC2AQ6UVW9 174 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NHLRC1Q6VVB1 395 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SYT10Q6XYQ8 523 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SIGLEC15Q6ZMC9 328 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CDHR3Q6ZTQ4 885 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CENPUQ71F23 418 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 BZW1Q7L1Q6 419 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 POLNQ7Z5Q5 900 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ADGRD2Q7Z7M1 963 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 LUZP2Q86TE4 346 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 COMTD1Q86VU5 262 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 LONP2Q86WA8 852 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PAQR7Q86WK9 346 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 CCDC60Q8IWA6 550 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 FAM114A1Q8IWE2 563 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 STHQ8IWL8 128 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 LAX1Q8IWV1 398 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 FAM9CQ8IZT9 166 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ARHGAP24Q8N264 748 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ZNF276Q8N554 614 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLC25A41Q8N5S1 370 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GCSAMQ8N6F7 178 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CNBD1Q8NA66 436 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MCPH1Q8NEM0 835 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 OR9K2Q8NGE7 335 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 OR10Q1Q8NGQ4 319 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ZNF671Q8TAW3 534 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLC44A1Q8WWI5 657 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TCP11Q8WWU5 503 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TFAP2BQ92481 460 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PIGBQ92521 554 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 HIST1H2ACQ93077 130 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ITFG2Q969R8 447 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TSACCQ96A04 125 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLC25A28Q96A46 364 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 EFHD2Q96C19 240 aaPredicted RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 HPDLQ96IR7 371 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GUCD1Q96NT3 240 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TAAR6Q96RI8 345 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NEU1Q99519 415 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CHP1Q99653 195 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 AIFM2Q9BRQ8 373 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 RIOK1Q9BRS2 568 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 CENPKQ9BS16 269 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MMTAG2Q9BU76 263 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLC39A8Q9C0K1 460 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 WWP1Q9H0M0 922 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PPIL3Q9H2H8 161 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 MTIF3Q9H2K0 278 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 DPEP2Q9H4A9 486 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ACTL8Q9H568 366 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MVB12BQ9H7P6 319 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 EVA1AQ9H8M9 152 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 UPF2Q9HAU5 1272 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 SGK2Q9HBY8 427 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NEK6Q9HC98 313 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TRPC7Q9HCX4 862 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MYNNQ9NPC7 610 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PDGFCQ9NRA1 345 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TPSG1Q9NRR2 321 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GKN1Q9NS71 199 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PNPLA3Q9NST1 481 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 RNF146Q9NTX7 359 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 TMEM74BQ9NUR3 256 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ACOXLQ9NUZ1 547 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SMPD4Q9NXE4 827 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLC2A8Q9NY64 477 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 FAM53CQ9NYF3 392 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 DLL3Q9NYJ7 618 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLC9A2Q9UBY0 812 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MALT1Q9UDY8 824 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 GAGE2DQ9UEU5 116 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 IL20RAQ9UHF4 553 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NOCTQ9UK39 431 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 FBXL2Q9UKC9 423 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 ANGPTL2Q9UKU9 493 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 CNOT6Q9ULM6 557 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 B3GALT5Q9Y2C3 310 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NOSIPQ9Y314 301 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 MRPS2Q9Y399 296 aaKnown RBP1.95□□□□□ -2.1
RTF1-207ENST00000561076 LOXL2Q9Y4K0 774 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 N6AMT1Q9Y5N5 214 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 MAD1L1Q9Y6D9 718 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 SLCO1B1Q9Y6L6 691 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 STON1Q9Y6Q2 735 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 COLEC10Q9Y6Z7 277 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 NPC1L1Q9UHC9 1359 aa1.95□□□□□ -2.1
RTF1-207ENST00000561076 PFASO15067 1338 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TRAV18A0A075B6X5 111 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 TRAV24A0A0B4J272 114 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 LOC100506127A0A0U1RQW1 187 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 A0A1B0GUL7 405 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 PRSS51A0A1B0GVH4 220 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 A0A1W2PPQ1 181 aa1.94□□□□□ -2.1
RTF1-207ENST00000561076 CCDC162PA2VCL2 907 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms