RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SDCCAG3Q96C92 435 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 ZNF778Q96MU6 729 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 KCNK13Q9HB14 408 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 MMP25Q9NPA2 562 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 KLHL1Q9NR64 748 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 GNPTGQ9UJJ9 305 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 ASB1Q9Y576 335 aa17.51■□□□□ 0.39
TPM1-226ENST00000560959 GOLGA6L9A6NEM1 432 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 DIAPH2O60879 1101 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 CCNDBP1O95273 360 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 SP1P08047 785 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 CD99P14209 185 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 ATP5DP30049 168 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 HSD17B2P37059 387 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 ART1P52961 327 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 SYT16Q17RD7 645 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 ANKRD20A4Q4UJ75 823 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 SLC25A25Q6KCM7 469 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 NCCRP1Q6ZVX7 275 aaPredicted RBP17.5■□□□□ 0.39
TPM1-226ENST00000560959 CRLF3Q8IUI8 442 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 MPP5Q8N3R9 675 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 AMER2Q8N7J2 671 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 OLFM1Q99784 485 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 ACAT2Q9BWD1 397 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 HES7Q9BYE0 225 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 SYNPO2LQ9H987 977 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 CATSPERZQ9NTU4 200 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 PCDHA13Q9Y5I0 950 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 NAV3Q8IVL0 2385 aa17.5■□□□□ 0.39
TPM1-226ENST00000560959 NSA2O95478 260 aaKnown RBP17.49■□□□□ 0.39
TPM1-226ENST00000560959 HOXB4P17483 251 aaPredicted RBP17.49■□□□□ 0.39
TPM1-226ENST00000560959 RPA3P35244 121 aaPredicted RBP17.49■□□□□ 0.39
TPM1-226ENST00000560959 MAT1AQ00266 395 aaKnown RBP17.49■□□□□ 0.39
TPM1-226ENST00000560959 GBX1Q14549 363 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 FCRLBQ6BAA4 426 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 GALNTL5Q7Z4T8 443 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 SLC5A8Q8N695 610 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 ASB5Q8WWX0 329 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 NPAS2Q99743 824 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 TMEM121Q9BTD3 319 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 TSPAN10Q9H1Z9 355 aaPredicted RBP17.49■□□□□ 0.39
TPM1-226ENST00000560959 PPT2Q9UMR5 302 aa17.49■□□□□ 0.39
TPM1-226ENST00000560959 SPG11Q96JI7 2443 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 ABCA2Q9BZC7 2435 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 IGHV3-20A0A0C4DH32 117 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 A0A0U1RQJ8 604 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 KRT87PA6NCN2 255 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 ZNF839A8K0R7 811 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 AKR1B15C9JRZ8 316 aaPredicted RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 CD3EAPO15446 510 aaKnown RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 FAM155BO75949 473 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 NEURL1O76050 574 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 STIP1P31948 543 aaKnown RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 GDF10P55107 478 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 ABATP80404 500 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 ICE2Q659A1 982 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 TMEM211Q6ICI0 200 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 LANCL3Q6ZV70 420 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 ANKRD37Q7Z713 158 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 LDB1Q86U70 411 aaPredicted RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 LILRB4Q8NHJ6 448 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 SLC35B2Q8TB61 432 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 MCOLN3Q8TDD5 553 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 ALG3Q92685 438 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 EBNA1BP2Q99848 306 aaKnown RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 SLC24A3Q9HC58 644 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 ANKRD10Q9NXR5 420 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 RUVBL2Q9Y230 463 aaKnown RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 TCAF1Q9Y4C2 921 aa17.48■□□□□ 0.39
TPM1-226ENST00000560959 ZNF469Q96JG9 3925 aaPredicted RBP17.48■□□□□ 0.39
TPM1-226ENST00000560959 GABRR3A8MPY1 467 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 MYO1CO00159 1063 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 NADKO95544 446 aaPredicted RBP17.47■□□□□ 0.39
TPM1-226ENST00000560959 FDFT1P37268 417 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 AADACL2Q6P093 401 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 SUSD1Q6UWL2 747 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 PPP1R21Q6ZMI0 780 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 DMRTC2Q8IXT2 367 aaPredicted RBP17.47■□□□□ 0.39
TPM1-226ENST00000560959 CCDC170Q8IYT3 715 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 OR51Q1Q8NH59 317 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 CXXC4Q9H2H0 198 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 TRIM45Q9H8W5 580 aaPredicted RBP17.47■□□□□ 0.39
TPM1-226ENST00000560959 LRFN1Q9P244 771 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 MARCH4Q9P2E8 410 aaPredicted RBP17.47■□□□□ 0.39
TPM1-226ENST00000560959 PCYOX1Q9UHG3 505 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 GTF3C1Q12789 2109 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 SCN2AQ99250 2005 aa17.47■□□□□ 0.39
TPM1-226ENST00000560959 NDUFS3O75489 264 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 ZNF24P17028 368 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 TAS2R50P59544 299 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 OC90Q02509 493 aaPredicted RBP17.46■□□□□ 0.39
TPM1-226ENST00000560959 TFF3Q07654 80 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 KLF1Q13351 362 aaPredicted RBP17.46■□□□□ 0.39
TPM1-226ENST00000560959 SPA17Q15506 151 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 MINDY4Q4G0A6 757 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 CES4AQ5XG92 561 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 FGD2Q7Z6J4 655 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 POGLUT1Q8NBL1 392 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms