RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 NXNL1Q96CM4 212 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 CATSPER2Q96P56 530 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 GPR78Q96P69 363 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 ATOH8Q96SQ7 321 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 PAFAH2Q99487 392 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 DHRS4Q9BTZ2 278 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 TXLNGQ9NUQ3 528 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 TCFL5Q9UL49 500 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 RUVBL1Q9Y265 456 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 SLC22A14Q9Y267 594 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 ACOT9Q9Y305 439 aa14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 TLN1Q9Y490 2541 aaKnown RBP14.57□□□□□ -0.08
SNRPA1-213ENST00000560856 A0A087WUV0 522 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 PABPN1LA6NDY0 278 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 LTA4HP09960 611 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 TFEBP19484 476 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 TNFRSF8P28908 595 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 BCL6P41182 706 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 GDF5P43026 501 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 PMS2P54278 862 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 RPS15AP62244 130 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 IRF9Q00978 393 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 UGT8Q16880 541 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 CATSPEREQ5SY80 951 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 RAPH1Q70E73 1250 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 CCDC91Q7Z6B0 441 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 CSNK1A1LQ8N752 337 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 PDPRQ8NCN5 879 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 KCTD4Q8WVF5 259 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 TM4SF19Q96DZ7 209 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 THAP11Q96EK4 314 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 EGFL8Q99944 293 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 TMEM79Q9BSE2 394 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 SPNS1Q9H2V7 528 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 ANKZF1Q9H8Y5 726 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 NMRAL1Q9HBL8 299 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 ZNF180Q9UJW8 692 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 PTBP2Q9UKA9 531 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 KALRNO60229 2985 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 MED13Q9UHV7 2174 aa14.56□□□□□ -0.08
SNRPA1-213ENST00000560856 A0A087X1B8 175 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 FEZF1A0PJY2 475 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 NCF1BA6NI72 391 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 NCF1CA8MVU1 366 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 ESPNB1AK53 854 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 C9J4A7 227 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 POC1B-GALNT4F8VUJ3 575 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 FOXS1O43638 330 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 PRAMEF4O60810 478 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 INHBAP08476 426 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 MTHFD2P13995 350 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 NCF1P14598 390 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 OR1D4P47884 311 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 SERPINB9P50453 376 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 CCR8P51685 355 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 FOXL2P58012 376 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 SLC9A5Q14940 896 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 DEFB109BQ30KR1 87 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 PRAMEF9Q5VWM5 478 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 MLIPQ5VWP3 458 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 FRA10AC1Q70Z53 315 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 OVCH1Q7RTY7 1134 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 TBC1D1Q86TI0 1168 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 ZNF740Q8NDX6 193 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 SLC5A11Q8WWX8 675 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 TSNARE1Q96NA8 513 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 SEMA4CQ9C0C4 833 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 SLC26A1Q9H2B4 701 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 ALG9Q9H6U8 611 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 IFT80Q9P2H3 777 aaPredicted RBP14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 NDOR1Q9UHB4 597 aa14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 MRPS2Q9Y399 296 aaKnown RBP14.55□□□□□ -0.08
SNRPA1-213ENST00000560856 COL6A6A6NMZ7 2263 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 A0A096LPK6 155 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 CDC14CA4D256 554 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 TK2O00142 265 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 KERAO60938 352 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 STATHP02808 62 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 TYK2P29597 1187 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 MSH2P43246 934 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 SERPINB8P50452 374 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 MEF2AQ02078 507 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 LY6DQ14210 128 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 SLC29A2Q14542 456 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 MUM1Q2TAK8 710 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 TAF1BQ53T94 588 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 FBXO48Q5FWF7 155 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 GARNL3Q5VVW2 1013 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 SULT1C3Q6IMI6 304 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 BORAQ6PGQ7 559 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 NXPE4Q6UWF7 544 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 SLCO4C1Q6ZQN7 724 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 PLD6Q8N2A8 252 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 METTL27Q8N6F8 245 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 MFSD9Q8NBP5 474 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 STAG3L4Q8TBR4 150 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 SLC39A7Q92504 469 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 RERGQ96A58 199 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 ESAMQ96AP7 390 aa14.54□□□□□ -0.08
SNRPA1-213ENST00000560856 FKBP10Q96AY3 582 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms