RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 RABIFP47224 123 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 GSK3BP49841 420 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 STARD6P59095 220 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 PHC1P78364 1004 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 PHEXP78562 749 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 LIPEQ05469 1076 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 SRSF11Q05519 484 aaKnown RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 LRIF1Q5T3J3 769 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 LCN8Q6JVE9 175 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 DHFR2Q86XF0 187 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 C2orf73Q8N5S3 287 aaPredicted RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 C1orf52Q8N6N3 182 aaKnown RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 ZNF740Q8NDX6 193 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 OR52E1Q8NGJ3 308 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 TOE1Q96GM8 510 aaKnown RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 NRTNQ99748 197 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 AIF1LQ9BQI0 150 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 EBPLQ9BY08 206 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 CHRDQ9H2X0 955 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 RMND5AQ9H871 391 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 SERHLQ9NQF3 203 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 C6orf203Q9P0P8 240 aaPredicted RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 ACTR3BQ9P1U1 418 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 GMPR2Q9P2T1 348 aaKnown RBP12.42□□□□□ -0.42
SNX1-211ENST00000560829 WNT16Q9UBV4 365 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 TBC1D29Q9UFV1 150 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 CA14Q9ULX7 337 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 CYP8B1Q9UNU6 501 aa12.42□□□□□ -0.42
SNX1-211ENST00000560829 PRSS51A0A1B0GVH4 220 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 A6NCN8 305 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 AQP12BA6NM10 295 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 PRICKLE3O43900 615 aaPredicted RBP12.41□□□□□ -0.42
SNX1-211ENST00000560829 KDM1AO60341 852 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 STAMBPO95630 424 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 HOXB9P17482 250 aaPredicted RBP12.41□□□□□ -0.42
SNX1-211ENST00000560829 NDUFS1P28331 727 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 HTR1EP28566 365 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 CCR8P51685 355 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 SRP54P61011 504 aaKnown RBP12.41□□□□□ -0.42
SNX1-211ENST00000560829 REEP5Q00765 189 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 PRDX1Q06830 199 aaKnown RBP12.41□□□□□ -0.42
SNX1-211ENST00000560829 UGT8Q16880 541 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 ANO7Q6IWH7 933 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 VN1R5Q7Z5H4 357 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 CAMKMTQ7Z624 323 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 SPATA24Q86W54 205 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 TMEM126BQ8IUX1 230 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 AQP12AQ8IXF9 295 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 MSRB3Q8IXL7 192 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 PQLC1Q8N2U9 271 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 OR8J2Q8NGG1 315 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 OR2A1Q8NGT9 310 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.41□□□□□ -0.421e-7■■□□□ 14.4
SNX1-211ENST00000560829 SH3KBP1Q96B97 665 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 PPM1MQ96MI6 270 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 TACO1Q9BSH4 297 aaKnown RBP12.41□□□□□ -0.42
SNX1-211ENST00000560829 ACAT2Q9BWD1 397 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 TRIM15Q9C019 465 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 LTB4R2Q9NPC1 389 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 GPR27Q9NS67 375 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 C2orf42Q9NWW7 574 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 VAPAQ9P0L0 249 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 PNMA8BQ9ULN7 279 aaPredicted RBP12.41□□□□□ -0.42
SNX1-211ENST00000560829 ICKQ9UPZ9 632 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 AP3M1Q9Y2T2 418 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 DGKBQ9Y6T7 804 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 COLEC10Q9Y6Z7 277 aa12.41□□□□□ -0.42
SNX1-211ENST00000560829 A0A096LPI6 279 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 NVLO15381 856 aaKnown RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 ZNF217O75362 1048 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 ANXA4P09525 319 aaPredicted RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 PTX3P26022 381 aaPredicted RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 CD6P30203 668 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 KIR3DL1P43629 444 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 MEF2AQ02078 507 aaPredicted RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 KRT33BQ14525 404 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 CMPK2Q5EBM0 449 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 ICE2Q659A1 982 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 Q6ZSR6 202 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 ARMCX6Q7L4S7 300 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 GPR180Q86V85 440 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 METTL4Q8N3J2 472 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 TSACCQ96A04 125 aaPredicted RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 BIRC7Q96CA5 298 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 RSRC1Q96IZ7 334 aaKnown RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 ITCHQ96J02 903 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 SH3GL1Q99961 368 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 PAIP1Q9H074 479 aaKnown RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 CUEDC1Q9NWM3 386 aaPredicted RBP12.4□□□□□ -0.42
SNX1-211ENST00000560829 SLC25A37Q9NYZ2 338 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 PCDHB11Q9Y5F2 797 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 KRBA1A5PL33 1030 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 PCDH7O60245 1069 aa12.4□□□□□ -0.42
SNX1-211ENST00000560829 DFNA5O60443 496 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms