RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PIWIL3Q7Z3Z3 882 aaKnown RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 NAT16Q8N8M0 369 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 OR2L2Q8NH16 312 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 GOT1L1Q8NHS2 421 aaPredicted RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 MAGEE2Q8TD90 523 aaPredicted RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 CHTF18Q8WVB6 975 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 GFM2Q969S9 779 aaKnown RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 ARRDC3Q96B67 414 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PYCR2Q96C36 320 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 MTFMTQ96DP5 389 aaKnown RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 DTNBP1Q96EV8 351 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PKP4Q99569 1192 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 CDCA3Q99618 268 aaPredicted RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 SH3GL3Q99963 347 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 BHLHE41Q9C0J9 482 aaPredicted RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 REXO4Q9GZR2 422 aaKnown RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 ATG10Q9H0Y0 220 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 TMEM245Q9H330 911 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 SGK2Q9HBY8 427 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 TIMMDC1Q9NPL8 285 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PRDM9Q9NQV7 894 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ATAD3AQ9NVI7 634 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 TMEM9Q9P0T7 183 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ZNF282Q9UDV7 671 aaPredicted RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 MBD1Q9UIS9 605 aaPredicted RBP9.38□□□□□ -0.91
RTF1-206ENST00000560447 C3orf18Q9UK00 162 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 BLOC1S6Q9UL45 172 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 PCDHB11Q9Y5F2 797 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 HCFC2Q9Y5Z7 792 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 HSPE1-MOB4S4R3N1 261 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 ATG2AQ2TAZ0 1938 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 COL4A3Q01955 1670 aa9.38□□□□□ -0.91
RTF1-206ENST00000560447 MAGEB17A8MXT2 336 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 E7EQ34 232 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 CLIC1O00299 241 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 RNASET2O00584 256 aaKnown RBP9.37□□□□□ -0.91
RTF1-206ENST00000560447 FPGTO14772 594 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 SPINT1O43278 529 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 MTX2O75431 263 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 PRKD3O94806 890 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 SLC16A8O95907 504 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 C1GALT1C1LP0DN25 315 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 C6P13671 934 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 COX7A2P14406 83 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 JUNBP17275 347 aaPredicted RBP9.37□□□□□ -0.91
RTF1-206ENST00000560447 CDH2P19022 906 aaPredicted RBP9.37□□□□□ -0.91
RTF1-206ENST00000560447 CD22P20273 847 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 IRS1P35568 1242 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 GPR1P46091 355 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 WNT3P56703 355 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 ERVK-21P61565 698 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 RBBP4Q09028 425 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 TEAD4Q15561 434 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 DUSP6Q16828 381 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 VMACQ2NL98 169 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 GAB4Q2WGN9 574 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 PGS1Q32NB8 556 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 LCTLQ6UWM7 567 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 IKBIPQ70UQ0 350 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 GPR141Q7Z602 305 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 ERI1Q8IV48 349 aaKnown RBP9.37□□□□□ -0.91
RTF1-206ENST00000560447 SLC30A8Q8IWU4 369 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 CLEC4FQ8N1N0 589 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 OXR1Q8N573 874 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 ZNF555Q8NEP9 628 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 VN1R2Q8NFZ6 395 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 OR7G3Q8NG95 312 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 FAM110BQ8TC76 370 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 SORCS1Q8WY21 1168 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 SUSD6Q92537 303 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 HDAC2Q92769 488 aaKnown RBP9.37□□□□□ -0.91
RTF1-206ENST00000560447 NCLNQ969V3 563 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 RAD51AP1Q96B01 352 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 COX14Q96I36 57 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 MAGED4Q96JG8 741 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 PANX1Q96RD7 426 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 DUSP26Q9BV47 211 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 TRIM8Q9BZR9 551 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 PCBD2Q9H0N5 130 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 IKZF5Q9H5V7 419 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 TM9SF3Q9HD45 589 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 HPS4Q9NQG7 708 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 AASDHPPTQ9NRN7 309 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 SPATA7Q9P0W8 599 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 RSL24D1Q9UHA3 163 aaKnown RBP9.37□□□□□ -0.91
RTF1-206ENST00000560447 PCDHGB4Q9UN71 923 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 USP22Q9UPT9 525 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 PCDHGB5Q9Y5G0 923 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 ORC6Q9Y5N6 252 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 CEPT1Q9Y6K0 416 aa9.37□□□□□ -0.91
RTF1-206ENST00000560447 PRRT4C9JH25 899 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 PLOD2O00469 737 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 GNGT2O14610 69 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 SLC16A6O15403 523 aa9.36□□□□□ -0.91
RTF1-206ENST00000560447 LZTS3O60299 673 aaPredicted RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 MRPS14O60783 128 aaKnown RBP9.36□□□□□ -0.91
RTF1-206ENST00000560447 TBX19O60806 448 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms