RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ALX4Q9H161 411 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CHST8Q9H2A9 424 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CDIP1Q9H305 208 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 MMP27Q9H306 513 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RIMS4Q9H426 269 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 FBXO44Q9H4M3 255 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 MEAF6Q9HAF1 191 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 MMP25Q9NPA2 562 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCNB1IP1Q9NPC3 277 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZCCHC3Q9NUD5 404 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TDP1Q9NUW8 608 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 RIC8BQ9NVN3 520 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 TMEM161AQ9NX61 479 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 USE1Q9NZ43 259 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 CLEC1BQ9P126 229 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF212Q9UDV6 495 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 UBQLN2Q9UHD9 624 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 BCAP29Q9UHQ4 241 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 FBXL7Q9UJT9 491 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 NFU1Q9UMS0 254 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PCDHA12Q9UN75 941 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 MGAT4BQ9UQ53 548 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 GDAQ9Y2T3 454 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 ARL2BPQ9Y2Y0 163 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRG3Q9Y2Y8 225 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SF3B6Q9Y3B4 125 aaKnown RBP4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 PCDHA2Q9Y5H9 948 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 GMPPBQ9Y5P6 360 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 GRIN2DO15399 1336 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 SPATA31A1Q5TZJ5 1347 aa4.36□□□□□ -1.71
HMGB3P26-201ENST00000560051 A0A0U1RQJ8 604 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PLSCR5A0PG75 271 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TMEM82A0PJX8 343 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAB19A4D1S5 217 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR2A25A4D2G3 310 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ARHGEF35A5YM69 484 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 C2orf71A6NGG8 1288 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 WASHC1A8K0Z3 465 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 YDJCA8MPS7 323 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 A8MUA0 341 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 A8MUI8 341 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 WASH3PC4AMC7 463 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 F8W036 122 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TRIM77I1YAP6 450 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MAN2B1O00754 1011 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CLDN4O14493 209 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 AURKAO14965 403 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TOX3O15405 576 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 DCXO43602 365 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SSX4O60224 188 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MITFO75030 526 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRPF6O94906 941 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 WDPCPO95876 746 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CXCL10P02778 98 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MT-ND2P03891 347 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 RLN1P04808 185 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 FCER2P06734 321 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CSF1RP07333 972 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CHRM2P08172 466 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MMP3P08254 477 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 F7P08709 466 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM58BPP0C7Q3 252 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 STAG3L1P0CL83 205 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CTPS1P17812 591 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PSMC3P17980 439 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 LBPP18428 481 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ADRA2CP18825 462 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MSH3P20585 1137 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 HNF1AP20823 631 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 ATP6V1C1P21283 382 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TGM2P21980 687 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 WARSP23381 471 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 HTR2AP28223 471 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SERPINA4P29622 427 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MC5RP33032 325 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CD80P33681 288 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 CYLC1P35663 651 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 P2RY2P41231 377 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 NAMPTP43490 491 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PPP3CCP48454 512 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 RGS4P49798 205 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TOB1P50616 345 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 P2RY4P51582 365 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 AP2S1P53680 142 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 UCP2P55851 309 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 SOX10P56693 466 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TXNL4AP83876 142 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 GRIN1Q05586 938 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 DUSP8Q13202 625 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 IL11RAQ14626 422 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 NR1I3Q14994 352 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PGM5Q15124 567 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 MAPK11Q15759 364 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 GPR19Q15760 415 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 PSG3Q16557 428 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 EXOC3L2Q2M3D2 409 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 TMEM44Q2T9K0 475 aa4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 EIF2S3LQ2VIR3 472 aaKnown RBP4.35□□□□□ -1.71
HMGB3P26-201ENST00000560051 NRN1LQ496H8 165 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms