RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PIK3CBP42338 1070 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 CDKN2CP42773 168 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 BDKRB1P46663 353 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 PREPP48147 710 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 NUP107P57740 925 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 PHEXP78562 749 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 VAC14Q08AM6 782 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 GRSF1Q12849 480 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 CAMK1Q14012 370 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ELOAQ14241 798 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ELAVL3Q14576 367 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 PDGFRLQ15198 375 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 HIST2H2ACQ16777 129 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 GAB4Q2WGN9 574 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 FNDC3BQ53EP0 1204 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 C9orf64Q5T6V5 341 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 BROXQ5VW32 411 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 HIST2H2AA3Q6FI13 130 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 CES5AQ6NT32 575 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SHQ1Q6PI26 577 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DHRS4L2Q6PKH6 230 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DOK6Q6PKX4 331 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ISLR2Q6UXK2 745 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 CBLL1Q75N03 491 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 EIF3MQ7L2H7 374 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 PIWIL3Q7Z3Z3 882 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 R3HCC1LQ7Z5L2 792 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DSG4Q86SJ6 1040 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 NPAS3Q8IXF0 933 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 C7orf61Q8IZ16 206 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 PHACTR4Q8IZ21 702 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SYNPOQ8N3V7 929 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SETD9Q8NE22 299 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 VN1R2Q8NFZ6 395 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 OR7G3Q8NG95 312 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 OR7A2PQ8NGA2 310 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 OR9A1PQ8NGU1 263 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 GOT1L1Q8NHS2 421 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 NETO1Q8TDF5 533 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF480Q8WV37 535 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ING5Q8WYH8 240 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SMG7Q92540 1137 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 MTERF3Q96E29 417 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 MED8Q96G25 268 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 HIC2Q96JB3 615 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 EGLN2Q96KS0 407 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 OR4K3Q96R72 315 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 PANX1Q96RD7 426 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DOK1Q99704 481 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 GDF15Q99988 308 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 TBCDQ9BTW9 1192 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DUSP26Q9BV47 211 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 NPLQ9BXD5 320 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 HDAC8Q9BY41 377 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ASPSCR1Q9BZE9 553 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 BHLHE41Q9C0J9 482 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ING2Q9H160 280 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 TOR3AQ9H497 397 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 RAD21L1Q9H4I0 556 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 TRPV4Q9HBA0 871 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 TRIM39Q9HCM9 518 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ATAD3AQ9NVI7 634 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 FAM118AQ9NWS6 357 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DEC1Q9P2X7 70 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF282Q9UDV7 671 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DNMT3AQ9Y6K1 912 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 HSPE1-MOB4S4R3N1 261 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 NUP214P35658 2090 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 C1orf226A1L170 272 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MGAT4DA6NG13 374 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 TRIM64BA6NI03 449 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 C1QTNF3-AMACRE9PGA6 284 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 RNASET2O00584 256 aaKnown RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 PI15O43692 258 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ABCB7O75027 752 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 UGT2B11O75310 529 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 LRATO95237 230 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 KCNK5O95279 499 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ANXA4P09525 319 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 C1GALT1C1LP0DN25 315 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 PCNAP12004 261 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 MYCLP1P12525 358 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-212ENST00000559937 C6P13671 934 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ADRB3P13945 408 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ENGP17813 658 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 FPR1P21462 350 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 IDSP22304 550 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 DCKP27707 260 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 TEAD1P28347 426 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 KDELR2P33947 212 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 BMP8BP34820 402 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 SHMT2P34897 504 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 RYKP34925 604 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 IRS1P35568 1242 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 HSD17B2P37059 387 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 GPR1P46091 355 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 ARHGDIAP52565 204 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 CDH15P55291 814 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 TBPL1P62380 186 aa7.8□□□□□ -1.16
SMAD3-212ENST00000559937 RAE1P78406 368 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms