RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ALDH18A1P54886 795 aaKnown RBP5.03□□□□□ -1.6
SPG11-220ENST00000559933 GFERP55789 205 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 OR1D5P58170 312 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 NFKB2Q00653 900 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 OCRLQ01968 901 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 HHEXQ03014 270 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 RCN2Q14257 317 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 RBBP7Q16576 425 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 NKPD1Q17RQ9 610 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 ARL13AQ5H913 290 aaPredicted RBP5.03□□□□□ -1.6
SPG11-220ENST00000559933 CATSPEREQ5SY80 951 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 PRAMEF13Q5VWM6 474 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 CLEC6AQ6EIG7 209 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 LAIR1Q6GTX8 287 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SULT1C3Q6IMI6 304 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 GUSBP11Q6P575 273 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 AGTRAPQ6RW13 159 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SCIMPQ6UWF3 145 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 ABRAXAS1Q6UWZ7 409 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 FRMD7Q6ZUT3 714 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 ASCL5Q7RTU5 278 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SYVN1Q86TM6 617 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 CUZD1Q86UP6 607 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 THOC6Q86W42 341 aaKnown RBP5.03□□□□□ -1.6
SPG11-220ENST00000559933 GKN2Q86XP6 184 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 WFDC3Q8IUB2 231 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 PLD3Q8IV08 490 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 TBC1D21Q8IYX1 336 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 ARL14Q8N4G2 192 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 POU5F2Q8N7G0 328 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 ZNF781Q8N8C0 355 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 OR6Y1Q8NGX8 325 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 PPP1R14CQ8TAE6 165 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 RDH11Q8TC12 318 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 MAPK15Q8TD08 544 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 MCOLN3Q8TDD5 553 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 LRRC8CQ8TDW0 803 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 UBTD2Q8WUN7 234 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SKA1Q96BD8 255 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 L3HYPDHQ96EM0 354 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SLC45A3Q96JT2 553 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 FOPNLQ96NB1 174 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 HBEGFQ99075 208 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 EDEM2Q9BV94 578 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 NUSAP1Q9BXS6 441 aaKnown RBP5.03□□□□□ -1.6
SPG11-220ENST00000559933 CD244Q9BZW8 370 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 KIR3DX1Q9H7L2 352 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SYNDIG1Q9H7V2 258 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 NOL11Q9H8H0 719 aaKnown RBP5.03□□□□□ -1.6
SPG11-220ENST00000559933 RDH14Q9HBH5 336 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SLC40A1Q9NP59 571 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SLC6A20Q9NP91 592 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 INTS7Q9NVH2 962 aaKnown RBP5.03□□□□□ -1.6
SPG11-220ENST00000559933 FGFR1OP2Q9NVK5 253 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 PNPOQ9NVS9 261 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 OGFRQ9NZT2 677 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 TMEM9Q9P0T7 183 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 CPNE7Q9UBL6 633 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 GIMAP2Q9UG22 337 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 KLHL3Q9UH77 587 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 TAC3Q9UHF0 121 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 SLC22A14Q9Y267 594 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 OTOGLQ3ZCN5 2332 aa5.03□□□□□ -1.6
SPG11-220ENST00000559933 ARID1BQ8NFD5 2236 aaPredicted RBP5.03□□□□□ -1.6
SPG11-220ENST00000559933 RALGAPA1Q6GYQ0 2036 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 DMXL1Q9Y485 3027 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 KCNE1BA0A087WTH5 132 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 IGKV1-8A0A0C4DH67 115 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 KIR2DS5A0A0G2JLQ3 304 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 A0A0G2JNG1 304 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CPED1A4D0V7 1026 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 E7ENX8 843 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 STX16-NPEPL1H3BU86 382 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 KIR2DS3K7RE56 304 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 STX16O14662 325 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 FFAR3O14843 346 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 HAT1O14929 419 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 GPR42O15529 346 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 HCRTR1O43613 425 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 KIF1CO43896 1103 aaKnown RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 SH3BP5O60239 455 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 TRIM13O60858 407 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SNNO75324 88 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 SH3BGRLO75368 114 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SKAP2O75563 359 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 STK16O75716 305 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 OR4F21O95013 312 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 HSPA4LO95757 839 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CER1O95813 267 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 BPNT1O95861 308 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 RETP07949 1114 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 VIMP08670 466 aaKnown RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 CHRM5P08912 532 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 ENO2P09104 434 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 HIST1H2AGP0C0S8 130 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 ERGP11308 486 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 UGT2B7P16662 529 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 HIST1H2ADP20671 130 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 IMPDH1P20839 514 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms