RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 PCDHGA11Q9Y5H2 935 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 KCNE2Q9Y6J6 123 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 MAOBP27338 520 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 DHPSP49366 369 aaPredicted RBP17.17■□□□□ 0.34
SNX1-208ENST00000559844 YBX1P67809 324 aaKnown RBP17.17■□□□□ 0.34
SNX1-208ENST00000559844 SIM2Q14190 667 aaPredicted RBP17.17■□□□□ 0.34
SNX1-208ENST00000559844 MAP7Q14244 749 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 CRTC3Q6UUV7 619 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 PLA2G15Q8NCC3 412 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 OR9A1PQ8NGU1 263 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 LRTOMTQ8WZ04 291 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 GTF2H4Q92759 462 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 GATA6Q92908 595 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 APIPQ96GX9 242 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 PPM1MQ96MI6 270 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 OR4K3Q96R72 315 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 OR52E6Q96RD3 313 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 PRRX2Q99811 253 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 BRF2Q9HAW0 419 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 SCOCQ9UIL1 159 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 MAGEL2Q9UJ55 1249 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 RAB26Q9ULW5 256 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 DMTF1Q9Y222 760 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 CA5BQ9Y2D0 317 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 DLGAP4Q9Y2H0 992 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 PCDHB3Q9Y5E6 796 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 DNMT3AQ9Y6K1 912 aaPredicted RBP17.17■□□□□ 0.34
SNX1-208ENST00000559844 R4GN57 208 aa17.17■□□□□ 0.34
SNX1-208ENST00000559844 ZFC3H1O60293 1989 aaKnown RBP17.16■□□□□ 0.34
SNX1-208ENST00000559844 H0YJX3 145 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 CD22P20273 847 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 CD27P26842 260 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 AKT2P31751 481 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 S100A3P33764 101 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 NUDT1P36639 197 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 E2F2Q14209 437 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 TBCELQ5QJ74 424 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 C10orf62Q5T681 223 aaPredicted RBP17.16■□□□□ 0.34
SNX1-208ENST00000559844 MSANTD1Q6ZTZ1 278 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 ERMP1Q7Z2K6 904 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 KRTCAP2Q8N6L1 136 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 TNIP2Q8NFZ5 429 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 ZNF480Q8WV37 535 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 EME1Q96AY2 570 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 TESCQ96BS2 214 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 REPS1Q96D71 796 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 ORAI3Q9BRQ5 295 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 TRIM8Q9BZR9 551 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 MIR1-1HGQ9H1L0 117 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 VPS29Q9UBQ0 182 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 DYRK1BQ9Y463 629 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 PI4KAP42356 2102 aa17.16■□□□□ 0.34
SNX1-208ENST00000559844 PRAMEF26H0Y7S4 382 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 PRMT3O60678 531 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 SDC1P18827 310 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 TEAD1P28347 426 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 IGFALSP35858 605 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 CLDN2P57739 230 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 CDK3Q00526 305 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 FOLH1Q04609 750 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 LYSMD4Q5XG99 296 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 ZC3H14Q6PJT7 736 aaKnown RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 HEATR4Q86WZ0 1026 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 SYTL1Q8IYJ3 562 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 DENND6BQ8NEG7 585 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 PRSS33Q8NF86 280 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 PPWD1Q96BP3 646 aaKnown RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 ZC3H10Q96K80 434 aaKnown RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 KCNH6Q9H252 994 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 MAN2B2Q9Y2E5 1009 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 SLCO1B1Q9Y6L6 691 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 TP53BP1Q12888 1972 aaPredicted RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 KLHL33A6NCF5 533 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 H0Y8X5 98 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 FPGTO14772 594 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 DENRO43583 198 aaKnown RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 ERN1O75460 977 aaKnown RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 MYO1DO94832 1006 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 FCGR1AP12314 374 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 ACADLP28330 430 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 HNRNPFP52597 415 aaKnown RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 TBPL1P62380 186 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 TCF15Q12870 199 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 DPY19L1Q2PZI1 675 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 WDR45BQ5MNZ6 344 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 NOXRED1Q6NXP6 359 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 TMEM154Q6P9G4 183 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 XKR5Q6UX68 686 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 LRRTM4Q86VH4 590 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 AMZ2Q86W34 360 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 ANKFN1Q8N957 763 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 TMEM145Q8NBT3 493 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 CLHC1Q8NHS4 586 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 STARD8Q92502 1023 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 ITCHQ96J02 903 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 AURKCQ9UQB9 309 aa17.15■□□□□ 0.34
SNX1-208ENST00000559844 RUVBL1Q9Y265 456 aaKnown RBP17.15■□□□□ 0.34
SNX1-208ENST00000559844 POM121BA6NF01 834 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms