RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NDUFS4O43181 175 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 HCRTR1O43613 425 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 OR1F1O43749 312 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 H2AFYO75367 372 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 KLF7O75840 302 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 PIAS1O75925 651 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 IPO13O94829 963 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 TSPAN12O95859 305 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 INHBAP08476 426 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 FURINP09958 794 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 CCDC166P0CW27 439 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 NCF1P14598 390 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 NPPBP16860 134 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 GNAZP19086 355 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 FBLP22087 321 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 MMP11P24347 488 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TYK2P29597 1187 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 OTX2P32243 289 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 OR1D4P47884 311 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 CCL11P51671 97 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 PRSS12P56730 875 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TAS2R39P59534 338 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 GPX6P59796 221 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 CDKL1Q00532 357 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TIAL1Q01085 375 aaKnown RBP eCLIP4.17□□□□□ -1.74
SNX1-205ENST00000559339 IL10RAQ13651 578 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ZNF460Q14592 562 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 HERC3Q15034 1050 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TRADDQ15628 312 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TSNQ15631 228 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 UAP1Q16222 522 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 FAM83EQ2M2I3 478 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 LACTB2Q53H82 288 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 CDKL4Q5MAI5 379 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ZNF385CQ66K41 422 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 SULT1C3Q6IMI6 304 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ZNF425Q6IV72 752 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 LCN10Q6JVE6 187 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 MRPL14Q6P1L8 145 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 PCSK4Q6UW60 755 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 FAM198BQ6UWH4 519 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ZDHHC24Q6UX98 284 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 MBOAT1Q6ZNC8 495 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ATG14Q6ZNE5 492 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ASB18Q6ZVZ8 466 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 PRICKLE2Q7Z3G6 844 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 PACS2Q86VP3 889 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 THOC6Q86W42 341 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 GPSM1Q86YR5 675 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 RELL1Q8IUW5 271 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 CEP97Q8IW35 865 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 LRRC56Q8IYG6 542 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 OR4N4Q8N0Y3 316 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 KRT78Q8N1N4 520 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ZNF843Q8N446 348 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 EXD3Q8N9H8 876 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TRPV3Q8NET8 790 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ABHD11Q8NFV4 315 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TTLQ8NG68 377 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 OR56A3Q8NH54 315 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 SLC13A3Q8WWT9 602 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TM9SF4Q92544 642 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 KIAA1191Q96A73 305 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 MIEF2Q96C03 454 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 PYCR2Q96C36 320 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 FBXL8Q96CD0 374 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 MMABQ96EY8 250 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 TSNARE1Q96NA8 513 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 RUFY1Q96T51 708 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 GPR22Q99680 433 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 AIF1LQ9BQI0 150 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 CRB3Q9BUF7 120 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 SLC25A23Q9BV35 468 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 SGPP1Q9BX95 441 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 DERL2Q9GZP9 239 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 SLC26A1Q9H2B4 701 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 CAB39LQ9H9S4 337 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 NMRAL1Q9HBL8 299 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ANKHQ9HCJ1 492 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ATP13A2Q9NQ11 1180 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ZNF71Q9NQZ8 489 aaPredicted RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 SEMA3GQ9NS98 782 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 C14orf105Q9NVL8 296 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 GPR83Q9NYM4 423 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 WWOXQ9NZC7 414 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 CD274Q9NZQ7 290 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 TRPC4Q9UBN4 977 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ANAPC2Q9UJX6 822 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 RNF112Q9ULX5 631 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 RUVBL1Q9Y265 456 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 SLC22A14Q9Y267 594 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 MTO1Q9Y2Z2 717 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 ACOT9Q9Y305 439 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 MAP4K5Q9Y4K4 846 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 PCDHGB7Q9Y5F8 929 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 PCDHGA9Q9Y5G4 932 aaKnown RBP4.17□□□□□ -1.74
SNX1-205ENST00000559339 MAU2Q9Y6X3 613 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 IGSF10Q6WRI0 2623 aa4.17□□□□□ -1.74
SNX1-205ENST00000559339 ATMQ13315 3056 aa4.16□□□□□ -1.74
SNX1-205ENST00000559339 PIEZO2Q9H5I5 2752 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms