RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 COPG1Q9Y678 874 aaKnown RBP16.88■□□□□ 0.29
TPM1-218ENST00000559281 SNRNP200O75643 2136 aaKnown RBP16.88■□□□□ 0.29
TPM1-218ENST00000559281 TNRC6AQ8NDV7 1962 aaKnown RBP16.88■□□□□ 0.29
TPM1-218ENST00000559281 A0A0A6YYC8 382 aaPredicted RBP16.87■□□□□ 0.29
TPM1-218ENST00000559281 NSG1A0A0A6YYJ2 146 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 IDSB3KWA1 339 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 I3L1I5 382 aaPredicted RBP16.87■□□□□ 0.29
TPM1-218ENST00000559281 NDC80O14777 642 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 ALOX12BO75342 701 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 FDXRP22570 491 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 CDKN2DP55273 166 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 TIAL1Q01085 375 aaKnown RBP eCLIP16.87■□□□□ 0.29
TPM1-218ENST00000559281 NAE1Q13564 534 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 HIF1AQ16665 826 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 RBM20Q5T481 1227 aaKnown RBP16.87■□□□□ 0.29
TPM1-218ENST00000559281 CAPN13Q6MZZ7 669 aaPredicted RBP16.87■□□□□ 0.29
TPM1-218ENST00000559281 IGFL2Q6UWQ7 119 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 ISLR2Q6UXK2 745 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 LAPTM4BQ86VI4 370 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 PLD3Q8IV08 490 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 IGDCC3Q8IVU1 814 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 KBTBD2Q8IY47 623 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 GPATCH11Q8N954 259 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 DNAJB14Q8TBM8 379 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 ALKBH8Q96BT7 664 aaKnown RBP16.87■□□□□ 0.29
TPM1-218ENST00000559281 CFAP36Q96G28 342 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 HAUS8Q9BT25 410 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 ATG10Q9H0Y0 220 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 ZBTB20Q9HC78 741 aaPredicted RBP16.87■□□□□ 0.29
TPM1-218ENST00000559281 ZNF160Q9HCG1 818 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 AGPAT4Q9NRZ5 378 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 ADAMTS6Q9UKP5 1117 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 FER1L5A0AVI2 2057 aa16.87■□□□□ 0.29
TPM1-218ENST00000559281 PTPN13Q12923 2485 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 H0YIG0 161 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 FOXS1O43638 330 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 GP1BBP13224 206 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 AP1S2P56377 157 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 AP2B1P63010 937 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 FRG1Q14331 258 aaKnown RBP16.86■□□□□ 0.29
TPM1-218ENST00000559281 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
TPM1-218ENST00000559281 HECTD2Q5U5R9 776 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 FAM45BPQ6NSW5 357 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 HIBCHQ6NVY1 386 aaPredicted RBP16.86■□□□□ 0.29
TPM1-218ENST00000559281 SPNS2Q8IVW8 549 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 ARHGEF39Q8N4T4 335 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 AMER3Q8N944 861 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 CAMKVQ8NCB2 501 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 FAM45AQ8TCE6 357 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 ATL1Q8WXF7 558 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 C8orf44Q96CB5 159 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 C19orf60Q96EN9 201 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 SNF8Q96H20 258 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 ASF1BQ9NVP2 202 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 ARL15Q9NXU5 204 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 CHMP2BQ9UQN3 213 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 TEX264Q9Y6I9 313 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 PCSK5Q92824 1860 aa16.86■□□□□ 0.29
TPM1-218ENST00000559281 USP27XA6NNY8 438 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 ICAM2P13598 275 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 ITGA8P53708 1063 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 CSNK1G2P78368 415 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 ELOAQ14241 798 aaKnown RBP16.85■□□□□ 0.29
TPM1-218ENST00000559281 TLR1Q15399 786 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 EIF2S3LQ2VIR3 472 aaKnown RBP16.85■□□□□ 0.29
TPM1-218ENST00000559281 DUPD1Q68J44 220 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 LCTLQ6UWM7 567 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 CUZD1Q86UP6 607 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 TBC1D19Q8N5T2 526 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 PRR7Q8TB68 274 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 METTL21AQ8WXB1 218 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 PSMG3-AS1Q96PY0 264 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 SGPP1Q9BX95 441 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 SYNPO2LQ9H987 977 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 RIC8BQ9NVN3 520 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 MKL2Q9ULH7 1088 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 PCDHGA10Q9Y5H3 936 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 ANKRD12Q6UB98 2062 aa16.85■□□□□ 0.29
TPM1-218ENST00000559281 DOPEY2Q9Y3R5 2298 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 A0A1W2PQ72 361 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 BLACEA4D250 179 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 P2RX6O15547 441 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 TTI1O43156 1089 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 SEC31AO94979 1220 aaKnown RBP16.84■□□□□ 0.29
TPM1-218ENST00000559281 NSA2O95478 260 aaKnown RBP16.84■□□□□ 0.29
TPM1-218ENST00000559281 SERPINA7P05543 415 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 UQCRHP07919 91 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 CYC1P08574 325 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 ENO2P09104 434 aaPredicted RBP16.84■□□□□ 0.29
TPM1-218ENST00000559281 NPPBP16860 134 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 Q0VFX4 171 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 ILF2Q12905 390 aaKnown RBP16.84■□□□□ 0.29
TPM1-218ENST00000559281 MFAP5Q13361 173 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 PHKG1Q16816 387 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 CRB2Q5IJ48 1285 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 B3GNTL1Q67FW5 361 aaPredicted RBP16.84■□□□□ 0.29
TPM1-218ENST00000559281 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 FAAH2Q6GMR7 532 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 RIPOR1Q6ZS17 1223 aa16.84■□□□□ 0.29
TPM1-218ENST00000559281 BBOF1Q8ND07 529 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms