RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SELENOSQ9BQE4 189 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 SARGQ9BW04 601 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 CD244Q9BZW8 370 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 PCBD2Q9H0N5 130 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 ACSS2Q9NR19 701 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 TMEM184CQ9NVA4 438 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 WWOXQ9NZC7 414 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 CD274Q9NZQ7 290 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 DHCR7Q9UBM7 475 aaKnown RBP10.93□□□□□ -0.66
SNX1-204ENST00000559061 IL17BQ9UHF5 180 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 PCDHGA4Q9Y5G9 962 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 SEC16AO15027 2179 aa10.93□□□□□ -0.66
SNX1-204ENST00000559061 KCNE1BA0A087WTH5 132 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 CCDC189A1A4V9 331 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 A8MT66 165 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 E2F3O00716 465 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 CPNE3O75131 537 aaKnown RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 CDH16O75309 829 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 LIFP15018 202 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 SLC18A2Q05940 514 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 PCDH1Q08174 1060 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 HYAL2Q12891 473 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 CDC16Q13042 620 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 PFKFB4Q16877 469 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 WASHC2DQ5SRD0 308 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 TMEM164Q5U3C3 297 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 FAM69BQ5VUD6 431 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 NXPE4Q6UWF7 544 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 RPS27LQ71UM5 84 aaKnown RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 LRRC70Q7Z2Q7 622 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 TMPRSS11BQ86T26 416 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 C17orf64Q86WR6 236 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 TMEM126BQ8IUX1 230 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 NLGN4XQ8N0W4 816 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 TCAIMQ8N3R3 496 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 PTGR2Q8N8N7 351 aaPredicted RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 NLGN4YQ8NFZ3 816 aaPredicted RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 ACMSDQ8TDX5 336 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 CT55Q8WUE5 264 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 WDR34Q96EX3 536 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 LRFN5Q96NI6 719 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 NSUN5Q96P11 429 aaKnown RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 ZIM3Q96PE6 472 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 HAUS8Q9BT25 410 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 ACTR5Q9H9F9 607 aaPredicted RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 PPCSQ9HAB8 311 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 ZBTB26Q9HCK0 441 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 GEMIN8Q9NWZ8 242 aaKnown RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 CPSF2Q9P2I0 782 aaKnown RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 COPG2Q9UBF2 871 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 SNX7Q9UNH6 387 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 RUVBL1Q9Y265 456 aaKnown RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 MRPS18BQ9Y676 258 aaKnown RBP10.92□□□□□ -0.66
SNX1-204ENST00000559061 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
SNX1-204ENST00000559061 DSPP15924 2871 aaKnown RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 MGAQ8IWI9 3026 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 ITPR1Q14643 2758 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 CCDC151A5D8V7 595 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 G3V2L1 256 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 PPP6CO00743 305 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 KLK10O43240 276 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 DLX3O60479 287 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 STK16O75716 305 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 IPO13O94829 963 aaKnown RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 PROCP04070 461 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 RPS17P08708 135 aaKnown RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 SCTRP47872 440 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 EFNA3P52797 238 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 ALDH18A1P54886 795 aaKnown RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 PCBP2Q15366 365 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNX1-204ENST00000559061 TSNAXIP1Q2TAA8 658 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 ZC3H12BQ5HYM0 836 aaKnown RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 RHBDD2Q6NTF9 364 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 C6orf15Q6UXA7 325 aaPredicted RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 PRSS41Q7RTY9 318 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 ADCK2Q7Z695 626 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 CACNA2D3Q8IZS8 1091 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 C4orf33Q8N1A6 199 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 MFSD9Q8NBP5 474 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 CREB3L4Q8TEY5 395 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 CABS1Q96KC9 395 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 MRPL57Q9BQC6 102 aaKnown RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 CCDC77Q9BR77 488 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 CHST8Q9H2A9 424 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 MRPL46Q9H2W6 279 aaKnown RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 PELI2Q9HAT8 420 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 FANCEQ9HB96 536 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 LHX9Q9NQ69 397 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 DNAJC11Q9NVH1 559 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 MKS1Q9NXB0 559 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 CROTQ9UKG9 612 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 PCTPQ9UKL6 214 aa10.91□□□□□ -0.66
SNX1-204ENST00000559061 ZNF490Q9ULM2 529 aaPredicted RBP10.91□□□□□ -0.66
SNX1-204ENST00000559061 NUP210LQ5VU65 1888 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 TRBC2A0A5B9 178 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 TLDC2A0PJX2 215 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 K7EPI3 171 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 MEN1O00255 615 aa10.9□□□□□ -0.66
SNX1-204ENST00000559061 OR7A17O14581 309 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms