RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CTSFQ9UBX1 484 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 PADI2Q9Y2J8 665 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 COL6A6A6NMZ7 2263 aa11.47□□□□□ -0.57
TPM1-216ENST00000558910 BSNQ9UPA5 3926 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 TARM1B6A8C7 271 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 E7ESA3 106 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 DSCR3O14972 297 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 P2RX6O15547 441 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 PHGDHO43175 533 aaKnown RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 PDGFAP04085 211 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 C8GP07360 202 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 MSL3P1P0C860 447 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 CDH1P12830 882 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 ITGAXP20702 1163 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 SKIV2L2P42285 1042 aaKnown RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 PMS2P54278 862 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 ARSFP54793 590 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 PRDX1Q06830 199 aaKnown RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 UAP1Q16222 522 aaPredicted RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 C18orf21Q32NC0 220 aaPredicted RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 FAAH2Q6GMR7 532 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 ZNF517Q6ZMY9 492 aaPredicted RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 ASB18Q6ZVZ8 466 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 ZC3HC1Q86WB0 502 aaKnown RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 RAB43Q86YS6 212 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 CEP97Q8IW35 865 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 PPM1NQ8N819 430 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 PROKR1Q8TCW9 393 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 IFT81Q8WYA0 676 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 RERGQ96A58 199 aaPredicted RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 TSNARE1Q96NA8 513 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 MESP1Q9BRJ9 268 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 SLC25A23Q9BV35 468 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 KLHL42Q9P2K6 505 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 CDC23Q9UJX2 597 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 RUVBL1Q9Y265 456 aaKnown RBP11.46□□□□□ -0.57
TPM1-216ENST00000558910 ANKRD12Q6UB98 2062 aa11.46□□□□□ -0.57
TPM1-216ENST00000558910 CCDC88CQ9P219 2028 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 A0A0A6YYC8 382 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 OR2A25A4D2G3 310 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 I3L1I5 382 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 NDC80O14777 642 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 KLF7O75840 302 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 TSPAN12O95859 305 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 ERGP11308 486 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 SFTPCP11686 197 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 FBLP22087 321 aaKnown RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 LORP23490 312 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 HSD17B2P37059 387 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 MAGEA4P43358 317 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 GPX6P59796 221 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 MAT1AQ00266 395 aaKnown RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 USP10Q14694 798 aaKnown RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 SLMAPQ14BN4 828 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 ARHGAP19Q14CB8 494 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 SYT16Q17RD7 645 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 FAM214AQ32MH5 1076 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 MFSD4BQ5TF39 518 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 ZDHHC24Q6UX98 284 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 FRA10AC1Q70Z53 315 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 RNF44Q7L0R7 432 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 C17orf64Q86WR6 236 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 LRRC56Q8IYG6 542 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 FBF1Q8TES7 1133 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 ANKRD49Q8WVL7 239 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 THAP4Q8WY91 577 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 CDKL2Q92772 493 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 TRIM44Q96DX7 344 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 MMABQ96EY8 250 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 VPS39Q96JC1 886 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 DPH2Q9BQC3 489 aaPredicted RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 TRIM54Q9BYV2 358 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 CHRNA10Q9GZZ6 450 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 GPAMQ9HCL2 828 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 ZNF304Q9HCX3 659 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 MOCS1Q9NZB8 636 aa11.45□□□□□ -0.58
TPM1-216ENST00000558910 MRPS2Q9Y399 296 aaKnown RBP11.45□□□□□ -0.58
TPM1-216ENST00000558910 FER1L5A0AVI2 2057 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 TCRBV9S1A1TA0A576 114 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 J3QKU1 62 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 PEX12O00623 359 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 SRPX2O60687 465 aaPredicted RBP11.44□□□□□ -0.58
TPM1-216ENST00000558910 UMODP07911 640 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 SNRPNP63162 240 aaKnown RBP11.44□□□□□ -0.58
TPM1-216ENST00000558910 TSNQ15631 228 aaKnown RBP11.44□□□□□ -0.58
TPM1-216ENST00000558910 RBBP7Q16576 425 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 NKG7Q16617 165 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 VWA2Q5GFL6 755 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 UBAP2Q5T6F2 1119 aaKnown RBP11.44□□□□□ -0.58
TPM1-216ENST00000558910 CAPN13Q6MZZ7 669 aaPredicted RBP11.44□□□□□ -0.58
TPM1-216ENST00000558910 LRRC8EQ6NSJ5 796 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 RAPH1Q70E73 1250 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 COX15Q7KZN9 410 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 MRGPREQ86SM8 312 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 SLC26A11Q86WA9 606 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 SHISA5Q8N114 240 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 AMER2Q8N7J2 671 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 TEX19Q8NA77 164 aa11.44□□□□□ -0.58
TPM1-216ENST00000558910 NOA1Q8NC60 698 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms