RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PDE10AQ9Y233 779 aa12.86□□□□□ -0.35
VPS18-203ENST00000558855 POLEQ07864 2286 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 IGHV3-20A0A0C4DH32 117 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 CTAGE15A4D2H0 777 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 MAP2K7O14733 419 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 NRDCO43847 1150 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 LCMT2O60294 686 aaKnown RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 DNAJB6O75190 326 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 TSPAN12O95859 305 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 ITGAMP11215 1152 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 EZRP15311 586 aaKnown RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 IVDP26440 423 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 TSFMP43897 325 aaKnown RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 EMP2P54851 167 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 OCA2Q04671 838 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 DHX9Q08211 1270 aaKnown RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 MFAP5Q13361 173 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 CRYMQ14894 314 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 ZNF169Q14929 603 aaPredicted RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 HP1BP3Q5SSJ5 553 aaPredicted RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 ADCK2Q7Z695 626 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 CTAGE6Q86UF2 777 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 PDSS2Q86YH6 399 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
VPS18-203ENST00000558855 TAAR6Q96RI8 345 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 SPNS1Q9H2V7 528 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 PTGFRNQ9P2B2 879 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 JRKLQ9Y4A0 524 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 MRFAP1Q9Y605 127 aa12.85□□□□□ -0.35
VPS18-203ENST00000558855 DIDO1Q9BTC0 2240 aaKnown RBP12.85□□□□□ -0.35
VPS18-203ENST00000558855 FEZF1A0PJY2 475 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 USP27XA6NNY8 438 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 B3GALT4O96024 378 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 IL1RNP18510 177 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 BCL6P41182 706 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 EMP3P54852 163 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 CSNK1G2P78368 415 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 SARNPP82979 210 aaKnown RBP12.84□□□□□ -0.35
VPS18-203ENST00000558855 CDC16Q13042 620 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 TTLL9Q3SXZ7 439 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 TRMT10BQ6PF06 316 aaKnown RBP12.84□□□□□ -0.35
VPS18-203ENST00000558855 PAQR3Q6TCH7 311 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 TMEM205Q6UW68 189 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 ISLR2Q6UXK2 745 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 PPIL6Q8IXY8 311 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 KCT2Q8NC54 265 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 C2CD4AQ8NCU7 369 aaPredicted RBP12.84□□□□□ -0.35
VPS18-203ENST00000558855 ZCCHC10Q8TBK6 192 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 ACTRT1Q8TDG2 376 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 TM9SF4Q92544 642 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 MOCOSQ96EN8 888 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 YIPF2Q9BWQ6 316 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 DRC3Q9H069 523 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 ATG10Q9H0Y0 220 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 HCN3Q9P1Z3 774 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 KLHL42Q9P2K6 505 aa12.84□□□□□ -0.35
VPS18-203ENST00000558855 CENPEQ02224 2701 aa12.83□□□□□ -0.35
VPS18-203ENST00000558855 LOC102723996A0A087X1L8 192 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 NSG1A0A0A6YYJ2 146 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 DNALI1O14645 258 aaPredicted RBP12.83□□□□□ -0.36
VPS18-203ENST00000558855 PFDN6O15212 129 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 TP73O15350 636 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 VPS26AO75436 327 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 BMP10O95393 424 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 AHSGP02765 367 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 ENO3P13929 434 aaPredicted RBP12.83□□□□□ -0.36
VPS18-203ENST00000558855 DCTP40126 519 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 FNTAP49354 379 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 TDGF1P3P51864 188 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 MEF2AQ02078 507 aaPredicted RBP12.83□□□□□ -0.36
VPS18-203ENST00000558855 THEMIS2Q5TEJ8 643 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 ARMC3Q5W041 872 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 ZNF324BQ6AW86 544 aaPredicted RBP12.83□□□□□ -0.36
VPS18-203ENST00000558855 NDUFAF7Q7L592 441 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 ST6GALNAC3Q8NDV1 305 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 MVB12AQ96EY5 273 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 IMMP1LQ96LU5 166 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 OR4K3Q96R72 315 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 OLFM1Q99784 485 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 SLX1AQ9BQ83 275 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 RBCK1Q9BYM8 510 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 TGIF2Q9GZN2 237 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 VN1R1Q9GZP7 353 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 MKL2Q9ULH7 1088 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 SNX12Q9UMY4 172 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 VPS9D1Q9Y2B5 631 aa12.83□□□□□ -0.36
VPS18-203ENST00000558855 MAGEB16A2A368 324 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 ZNF860A6NHJ4 632 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 SGK494L7N484 410 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 FANCGO15287 622 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 MAN1A2O60476 641 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 CCNDBP1O95273 360 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 HEXBP07686 556 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 CDH1P12830 882 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 PGAM1P18669 254 aa12.82□□□□□ -0.36
VPS18-203ENST00000558855 VARSP26640 1264 aaKnown RBP12.82□□□□□ -0.36
VPS18-203ENST00000558855 ABATP80404 500 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms