RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 C1QTNF9P0C862 333 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 BCL6P41182 706 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 ERVPABLB-1P60509 514 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 RPS15AP62244 130 aaKnown RBP16.69■□□□□ 0.26
TPM1-214ENST00000558544 REEP5Q00765 189 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 SLBPQ14493 270 aaKnown RBP eCLIP16.69■□□□□ 0.26
TPM1-214ENST00000558544 TBC1D25Q3MII6 688 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 XKR6Q5GH73 641 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 PRAMEF9Q5VWM5 478 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 ATG9BQ674R7 924 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 RPS27LQ71UM5 84 aaKnown RBP16.69■□□□□ 0.26
TPM1-214ENST00000558544 BPHLQ86WA6 291 aaPredicted RBP16.69■□□□□ 0.26
TPM1-214ENST00000558544 GPR135Q8IZ08 494 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 ZNF740Q8NDX6 193 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 RDH11Q8TC12 318 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 TMEM237Q96Q45 408 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 OR2A5Q96R48 311 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 AIF1LQ9BQI0 150 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 ULBP3Q9BZM4 244 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 B3GNT4Q9C0J1 378 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 CCDC86Q9H6F5 360 aaKnown RBP16.69■□□□□ 0.26
TPM1-214ENST00000558544 VIPAS39Q9H9C1 493 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 ACSS2Q9NR19 701 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 PCTPQ9UKL6 214 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 CHD8Q9HCK8 2581 aa16.69■□□□□ 0.26
TPM1-214ENST00000558544 ZFHX4Q86UP3 3567 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 H0YGG7 62 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 LCMT2O60294 686 aaKnown RBP16.68■□□□□ 0.26
TPM1-214ENST00000558544 KIAA0754O94854 1291 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 STATHP02808 62 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 C1GALT1C1LP0DN25 315 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 ARF3P61204 181 aaPredicted RBP16.68■□□□□ 0.26
TPM1-214ENST00000558544 HERVK_113P63132 956 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 RELAQ04206 551 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 CHIT1Q13231 466 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 DOC2AQ14183 400 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 METTL2BQ6P1Q9 378 aaKnown RBP16.68■□□□□ 0.26
TPM1-214ENST00000558544 UNQ6494/PRO21346Q6UXR6 183 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 SLC22A9Q8IVM8 553 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 ZNF655Q8N720 491 aaPredicted RBP16.68■□□□□ 0.26
TPM1-214ENST00000558544 RERGQ96A58 199 aaPredicted RBP16.68■□□□□ 0.26
TPM1-214ENST00000558544 MOCOSQ96EN8 888 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 ZNF285Q96NJ3 590 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 NSUN5Q96P11 429 aaKnown RBP16.68■□□□□ 0.26
TPM1-214ENST00000558544 ERVK-6Q9BXR3 956 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 GEMIN8Q9NWZ8 242 aaKnown RBP16.68■□□□□ 0.26
TPM1-214ENST00000558544 COPG2Q9UBF2 871 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 MID2Q9UJV3 735 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 PCDHGA4Q9Y5G9 962 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 ACTL7BQ9Y614 415 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 CELSR3Q9NYQ7 3312 aa16.68■□□□□ 0.26
TPM1-214ENST00000558544 TRBC2A0A5B9 178 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 ZSCAN9O15535 394 aaPredicted RBP16.67■□□□□ 0.26
TPM1-214ENST00000558544 ZNF749O43361 778 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 OR1F1O43749 312 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 SRPX2O60687 465 aaPredicted RBP16.67■□□□□ 0.26
TPM1-214ENST00000558544 STK17BO94768 372 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 NTRK1P04629 796 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 CPA3P15088 417 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 CD22P20273 847 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 PIK3CGP48736 1102 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 PRKAA2P54646 552 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 IRF8Q02556 426 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 PCLAFQ15004 111 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 TCTE1Q5JU00 501 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 WASHC2DQ5SRD0 308 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 ZNF678Q5SXM1 525 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 VN1R4Q7Z5H5 301 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 ZFAND4Q86XD8 727 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 ZNF483Q8TF39 744 aaPredicted RBP16.67■□□□□ 0.26
TPM1-214ENST00000558544 TLCD1Q96CP7 247 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 CCDC126Q96EE4 140 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 PTCD3Q96EY7 689 aaKnown RBP16.67■□□□□ 0.26
TPM1-214ENST00000558544 C1QTNF3Q9BXJ4 246 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 EHD1Q9H4M9 534 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 NOL11Q9H8H0 719 aaKnown RBP16.67■□□□□ 0.26
TPM1-214ENST00000558544 IPPKQ9H8X2 491 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 ZBTB26Q9HCK0 441 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 SSU72Q9NP77 194 aaKnown RBP16.67■□□□□ 0.26
TPM1-214ENST00000558544 SEMA4BQ9NPR2 832 aaPredicted RBP16.67■□□□□ 0.26
TPM1-214ENST00000558544 SCN3AQ9NY46 2000 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 IGF2RP11717 2491 aa16.67■□□□□ 0.26
TPM1-214ENST00000558544 TEX51A0A1B0GUA7 166 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 P2RX6O15547 441 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 TLX3O43711 291 aaPredicted RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 H2AFYO75367 372 aaKnown RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 KATNA1O75449 491 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 SUPT7LO94864 414 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 TSPAN8P19075 237 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 IMPDH1P20839 514 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 CXCR2P25025 360 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 CD82P27701 267 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 MAGOHP61326 146 aaKnown RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 FOXK2Q01167 660 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 RBBP5Q15291 538 aaKnown RBP16.66■□□□□ 0.26
TPM1-214ENST00000558544 HKDC1Q2TB90 917 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 UNC50Q53HI1 259 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 TLDC1Q6P9B6 456 aa16.66■□□□□ 0.26
TPM1-214ENST00000558544 TBC1D19Q8N5T2 526 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms