RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CUTCQ9NTM9 273 aa11.81□□□□□ -0.52
SMAD3-205ENST00000558428 NDOR1Q9UHB4 597 aa11.81□□□□□ -0.52
SMAD3-205ENST00000558428 KCND3Q9UK17 655 aa11.81□□□□□ -0.52
SMAD3-205ENST00000558428 LHX6Q9UPM6 363 aa11.81□□□□□ -0.52
SMAD3-205ENST00000558428 MRPS18BQ9Y676 258 aaKnown RBP11.81□□□□□ -0.52
SMAD3-205ENST00000558428 KCNE2Q9Y6J6 123 aa11.81□□□□□ -0.52
SMAD3-205ENST00000558428 SCN3AQ9NY46 2000 aa11.81□□□□□ -0.52
SMAD3-205ENST00000558428 NBEAQ8NFP9 2946 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 A0A1B0GX78 115 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 FEZF1A0PJY2 475 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 CCDC189A1A4V9 331 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 HYKKA2RU49 373 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 FITM1A5D6W6 292 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 ZNF891A8MT65 544 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 TERTO14746 1132 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 STK16O75716 305 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 IPO13O94829 963 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 GGT5P36269 586 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 GCGRP47871 477 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 RPS15P62841 145 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 DCDP81605 110 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 MEF2AQ02078 507 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 CDC16Q13042 620 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 TSNAXIP1Q2TAA8 658 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 HKDC1Q2TB90 917 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 PRTGQ2VWP7 1150 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 FAM214AQ32MH5 1076 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 CATSPEREQ5SY80 951 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 YOD1Q5VVQ6 348 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 ZNF385CQ66K41 422 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 EMBQ6PCB8 327 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 TIFABQ6ZNK6 161 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 TMPRSS11BQ86T26 416 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 KLHDC8AQ8IYD2 350 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 ABHD11Q8NFV4 315 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 AENQ8WTP8 325 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 STARD8Q92502 1023 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 CABS1Q96KC9 395 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 SCYL1Q96KG9 808 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 GPR78Q96P69 363 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 PARD6BQ9BYG5 372 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 PELI2Q9HAT8 420 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 ZNF358Q9NW07 568 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 TBK1Q9UHD2 729 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 PTBP2Q9UKA9 531 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 RUVBL1Q9Y265 456 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 FARSAQ9Y285 508 aaKnown RBP11.8□□□□□ -0.52
SMAD3-205ENST00000558428 ITPR1Q14643 2758 aa11.8□□□□□ -0.52
SMAD3-205ENST00000558428 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 C9J4A7 227 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 TXNDC9O14530 226 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 DSCR3O14972 297 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 P2RX6O15547 441 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 LCMT2O60294 686 aaKnown RBP11.79□□□□□ -0.52
SMAD3-205ENST00000558428 CCNT2O60583 730 aaKnown RBP11.79□□□□□ -0.52
SMAD3-205ENST00000558428 RFPL1O75677 317 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 STATHP02808 62 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 RBP1P09455 135 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 COL6A2P12110 1019 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 MTHFD2P13995 350 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 GFAPP14136 432 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 GNAZP19086 355 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 BCL6P41182 706 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 SLCO1A2P46721 670 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 SLC9A5Q14940 896 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 MUM1Q2TAK8 710 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 TECRLQ5HYJ1 363 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 C16orf46Q6P387 395 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 NXPE4Q6UWF7 544 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 FAM198BQ6UWH4 519 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 CNPY4Q8N129 248 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 TBC1D19Q8N5T2 526 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 ENDOVQ8N8Q3 282 aaKnown RBP11.79□□□□□ -0.52
SMAD3-205ENST00000558428 SNX31Q8N9S9 440 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 OR4K1Q8NGD4 311 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 SNRNP27Q8WVK2 155 aaKnown RBP11.79□□□□□ -0.52
SMAD3-205ENST00000558428 THAP11Q96EK4 314 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 C10orf90Q96M02 699 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 C17orf62Q9BQA9 187 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 AIF1LQ9BQI0 150 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 GPR87Q9BY21 358 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 NLNQ9BYT8 704 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 SPNS1Q9H2V7 528 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 ACTL8Q9H568 366 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 PPCSQ9HAB8 311 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 DNAJC11Q9NVH1 559 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 IFT80Q9P2H3 777 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-205ENST00000558428 GPN3Q9UHW5 284 aaPredicted RBP11.79□□□□□ -0.52
SMAD3-205ENST00000558428 PCDHGA6Q9Y5G7 932 aa11.79□□□□□ -0.52
SMAD3-205ENST00000558428 ZFYVE26Q68DK2 2539 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 KCNE1BA0A087WTH5 132 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 TRBC2A0A5B9 178 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 MAP2K7O14733 419 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CLGNO14967 610 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 NKX2-8O15522 239 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 OR1F1O43749 312 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 CREG1O75629 220 aa11.78□□□□□ -0.52
SMAD3-205ENST00000558428 MED26O95402 600 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms