RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 KRT35Q92764 455 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 CYTH2Q99418 400 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 PLCD4Q9BRC7 762 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 VN1R1Q9GZP7 353 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 SLC24A3Q9HC58 644 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 KCNJ16Q9NPI9 418 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 LRFN1Q9P244 771 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 EFR3BQ9Y2G0 817 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 NFS1Q9Y697 457 aa16.83■□□□□ 0.28
TSPAN3-204ENST00000558394 PRRC2AP48634 2157 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 A0A1W2PPV9 198 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 SOWAHDA6NJG2 315 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 ADAM10O14672 748 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 TJP3O95049 919 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 TPOP07202 933 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 KLK2P20151 261 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 PTGS2P35354 604 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 AGTR2P50052 363 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 HADHBP55084 474 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 FOLH1Q04609 750 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 ACTN3Q08043 901 aaPredicted RBP16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 FAM53BQ14153 422 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 CCSMST1Q4G0I0 132 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 LANCL3Q6ZV70 420 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 OR13J1Q8NGT2 312 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 M1APQ8TC57 530 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 FOXC2Q99958 501 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 KCNN3Q9UGI6 736 aa16.82■□□□□ 0.28
TSPAN3-204ENST00000558394 KRT87PA6NCN2 255 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 USP27XA6NNY8 438 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 PRMT5O14744 637 aaPredicted RBP16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 FOXS1O43638 330 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 CCNDBP1O95273 360 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 METTL18O95568 372 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 IGFBP2P18065 325 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 CHRNB4P30926 498 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 YBX1P67809 324 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 ADCK2Q7Z695 626 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 DMRTC2Q8IXT2 367 aaPredicted RBP16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 SMPDL3AQ92484 453 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 RND1Q92730 232 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 ABHD10Q9NUJ1 306 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 SLC2A6Q9UGQ3 507 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 GNPTGQ9UJJ9 305 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 RUVBL2Q9Y230 463 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 ASB1Q9Y576 335 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 ABCA4P78363 2273 aa16.81■□□□□ 0.28
TSPAN3-204ENST00000558394 A0A0U1RQJ8 604 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 NKX2-6A6NCS4 301 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 TFECO14948 347 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 SLC25A12O75746 678 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 EZRP15311 586 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 TTPAP49638 278 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 CDH17Q12864 832 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 TSTD2Q5T7W7 516 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 C11orf63Q6NUN7 778 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 CAVIN1Q6NZI2 390 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 SUSD1Q6UWL2 747 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 CD163Q86VB7 1156 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 PAQR7Q86WK9 346 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 FAM71DQ8N9W8 422 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 OR52K1Q8NGK4 314 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 LILRB4Q8NHJ6 448 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 FAM57AQ8TBR7 257 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 NRGNQ92686 78 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 NINJ1Q92982 152 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 OR2A5Q96R48 311 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 LPAR4Q99677 370 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 MMP25Q9NPA2 562 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 NPDC1Q9NQX5 325 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 PCYOX1Q9UHG3 505 aa16.8■□□□□ 0.28
TSPAN3-204ENST00000558394 H0YIG0 161 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 MAGEA1P43355 309 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 EFNA3P52797 238 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 PTK6Q13882 451 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 SEMA3AQ14563 771 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 ANKRD20A4Q4UJ75 823 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 PAPD4Q6PIY7 484 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 PPP1R21Q6ZMI0 780 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 ANKRD37Q7Z713 158 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 CLYBLQ8N0X4 340 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 CPSF7Q8N684 471 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 OR9A1PQ8NGU1 263 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 OR9A4Q8NGU2 314 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 TMEM125Q96AQ2 219 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 OLFM1Q99784 485 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 UCK2Q9BZX2 261 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 CXXC4Q9H2H0 198 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 CDCP1Q9H5V8 836 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 CATSPERZQ9NTU4 200 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 CCM2LQ9NUG4 571 aaPredicted RBP16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 TAC3Q9UHF0 121 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 TSR3Q9UJK0 312 aaKnown RBP16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 EDARQ9UNE0 448 aa16.79■□□□□ 0.28
TSPAN3-204ENST00000558394 A0A1B0GTH9 108 aa16.78■□□□□ 0.28
TSPAN3-204ENST00000558394 GOLGA6L9A6NEM1 432 aa16.78■□□□□ 0.28
TSPAN3-204ENST00000558394 TMEM200CA6NKL6 621 aa16.78■□□□□ 0.28
TSPAN3-204ENST00000558394 ZNF839A8K0R7 811 aa16.78■□□□□ 0.28
TSPAN3-204ENST00000558394 CDK2AP1O14519 115 aa16.78■□□□□ 0.28
TSPAN3-204ENST00000558394 NDC80O14777 642 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms