RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TAC1P20366 129 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 VARSP26640 1264 aaKnown RBP24.43■■□□□ 1.5
SMAD6-202ENST00000557916 SLCO4C1Q6ZQN7 724 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 CROCCP2Q86T23 111 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 NLGN4XQ8N0W4 816 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 SLC38A9Q8NBW4 561 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 NLGN4YQ8NFZ3 816 aaPredicted RBP24.43■■□□□ 1.5
SMAD6-202ENST00000557916 CLIP3Q96DZ5 547 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 DCBLD2Q96PD2 775 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 ENAMQ9NRM1 1142 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 WDR70Q9NW82 654 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 AHCTF1Q8WYP5 2266 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 ACACAQ13085 2346 aa24.43■■□□□ 1.5
SMAD6-202ENST00000557916 SPTBP11277 2137 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 KCNE1BA0A087WTH5 132 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 LRRC14BA6NHZ5 514 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 STX16-NPEPL1H3BU86 382 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 STX16O14662 325 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 RRP8O43159 456 aaKnown RBP24.42■■□□□ 1.5
SMAD6-202ENST00000557916 LCMT2O60294 686 aaKnown RBP24.42■■□□□ 1.5
SMAD6-202ENST00000557916 SIX3O95343 332 aaPredicted RBP24.42■■□□□ 1.5
SMAD6-202ENST00000557916 HBQ1P09105 142 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 C1GALT1C1LP0DN25 315 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 EPB42P16452 691 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 BCL6P41182 706 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 MAP7Q14244 749 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 GRM7Q14831 915 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 ATG9BQ674R7 924 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 CACNA2D3Q8IZS8 1091 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 TBC1D19Q8N5T2 526 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 ESX1Q8N693 406 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 TEX9Q8N6V9 391 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 TTC29Q8NA56 475 aaPredicted RBP24.42■■□□□ 1.5
SMAD6-202ENST00000557916 NKD1Q969G9 470 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 ZBTB9Q96C00 473 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 THAP11Q96EK4 314 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 AIF1LQ9BQI0 150 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 NDC1Q9BTX1 674 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 DPH1Q9BZG8 443 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 EMCNQ9ULC0 261 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 ANGPTL3Q9Y5C1 460 aa24.42■■□□□ 1.5
SMAD6-202ENST00000557916 DMXL2Q8TDJ6 3036 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 A8MT66 165 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 OR1F1O43749 312 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 H2AFYO75367 372 aaKnown RBP24.41■■□□□ 1.5
SMAD6-202ENST00000557916 CCNYL3P0C7X3 344 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 EPORP19235 508 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 EEF1DP29692 281 aaKnown RBP24.41■■□□□ 1.5
SMAD6-202ENST00000557916 ATP1A2P50993 1020 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 CLN3Q13286 438 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 METTL2BQ6P1Q9 378 aaKnown RBP24.41■■□□□ 1.5
SMAD6-202ENST00000557916 CSNK1A1LQ8N752 337 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 ZNF740Q8NDX6 193 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 SARGQ9BW04 601 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 SPNS1Q9H2V7 528 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 CENPHQ9H3R5 247 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 ARGLU1Q9NWB6 273 aaPredicted RBP24.41■■□□□ 1.5
SMAD6-202ENST00000557916 SRPK3Q9UPE1 567 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 PCDHGA4Q9Y5G9 962 aa24.41■■□□□ 1.5
SMAD6-202ENST00000557916 TRBC2A0A5B9 178 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 FITM1A5D6W6 292 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 ARSFP54793 590 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 REEP5Q00765 189 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 COL9A2Q14055 689 aaPredicted RBP24.4■■□□□ 1.5
SMAD6-202ENST00000557916 CCDC153Q494R4 210 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 XKR6Q5GH73 641 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 RHBDD2Q6NTF9 364 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 BANPQ8N9N5 519 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 MFSD9Q8NBP5 474 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 LRFN5Q96NI6 719 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 EHD1Q9H4M9 534 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 GEMIN8Q9NWZ8 242 aaKnown RBP24.4■■□□□ 1.5
SMAD6-202ENST00000557916 PADI1Q9ULC6 663 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 ZMIZ1Q9ULJ6 1067 aa24.4■■□□□ 1.5
SMAD6-202ENST00000557916 KLK10O43240 276 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 DLX3O60479 287 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 PRAMEF4O60810 478 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 ATP5F1P24539 256 aaPredicted RBP24.39■■□□□ 1.5
SMAD6-202ENST00000557916 CXCR2P25025 360 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 GCGRP47871 477 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 IRF8Q02556 426 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 GPS2Q13227 327 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 CHIT1Q13231 466 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 DOC2AQ14183 400 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 SLBPQ14493 270 aaKnown RBP eCLIP24.39■■□□□ 1.5
SMAD6-202ENST00000557916 CASP8Q14790 479 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 HKDC1Q2TB90 917 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 FAM214AQ32MH5 1076 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 YOD1Q5VVQ6 348 aaPredicted RBP24.39■■□□□ 1.5
SMAD6-202ENST00000557916 PRAMEF9Q5VWM5 478 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 LRRC69Q6ZNQ3 347 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 VN1R4Q7Z5H5 301 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 IL22RA1Q8N6P7 574 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 APOPT1Q96IL0 206 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 SMC6Q96SB8 1091 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 IQCGQ9H095 443 aaKnown RBP24.39■■□□□ 1.5
SMAD6-202ENST00000557916 C12orf65Q9H3J6 166 aaKnown RBP24.39■■□□□ 1.5
SMAD6-202ENST00000557916 LHX9Q9NQ69 397 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 CUTCQ9NTM9 273 aa24.39■■□□□ 1.5
SMAD6-202ENST00000557916 TXLNGQ9NUQ3 528 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms