RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 PTRHD1Q6GMV3 140 aaKnown RBP17.31■□□□□ 0.36
ABCD4-228ENST00000557588 SPINK14Q6IE38 97 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 AADACL2Q6P093 401 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 C3P1Q6ZMU1 363 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 OTOAQ7RTW8 1153 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 GALNTL5Q7Z4T8 443 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 FGD2Q7Z6J4 655 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 LDB1Q86U70 411 aaPredicted RBP17.31■□□□□ 0.36
ABCD4-228ENST00000557588 VSTM4Q8IW00 320 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 DNAAF3Q8N9W5 541 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 FAM98AQ8NCA5 519 aaKnown RBP17.31■□□□□ 0.36
ABCD4-228ENST00000557588 RERGQ96A58 199 aaPredicted RBP17.31■□□□□ 0.36
ABCD4-228ENST00000557588 FOPNLQ96NB1 174 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 CYTH2Q99418 400 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 P2RY12Q9H244 342 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 KCNK13Q9HB14 408 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 MARCH4Q9P2E8 410 aaPredicted RBP17.31■□□□□ 0.36
ABCD4-228ENST00000557588 GNPTGQ9UJJ9 305 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 HCFC1P51610 2035 aa17.31■□□□□ 0.36
ABCD4-228ENST00000557588 FOXO6A8MYZ6 492 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 H0YIG0 161 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 ZNHIT1O43257 154 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 MAN1A2O60476 641 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 NEURL1O76050 574 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 SUN1O94901 812 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 CD99P14209 185 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 PKMP14618 531 aaKnown RBP17.3■□□□□ 0.36
ABCD4-228ENST00000557588 ZNF24P17028 368 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 ADRA1DP25100 572 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 RWDD2BP57060 319 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 EXT1Q16394 746 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.3■□□□□ 0.36
ABCD4-228ENST00000557588 LGI4Q8N135 537 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 HORMAD2Q8N7B1 307 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 SMPDL3AQ92484 453 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 MMP25Q9NPA2 562 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 NPDC1Q9NQX5 325 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-228ENST00000557588 CATSPERZQ9NTU4 200 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 UTP6Q9NYH9 597 aaKnown RBP17.3■□□□□ 0.36
ABCD4-228ENST00000557588 TFR2Q9UP52 801 aa17.3■□□□□ 0.36
ABCD4-228ENST00000557588 GABRR3A8MPY1 467 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 MYO1CO00159 1063 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 CBFA2T2O43439 604 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 CCNDBP1O95273 360 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 MATN4O95460 622 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 SP1P08047 785 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 RPS3P23396 243 aaKnown RBP eCLIP17.29■□□□□ 0.36
ABCD4-228ENST00000557588 ATP5DP30049 168 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 RPA3P35244 121 aaPredicted RBP17.29■□□□□ 0.36
ABCD4-228ENST00000557588 CETN2P41208 172 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 AVPR1BP47901 424 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 AGTR2P50052 363 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 SNRPNP63162 240 aaKnown RBP17.29■□□□□ 0.36
ABCD4-228ENST00000557588 TFF3Q07654 80 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 PTK6Q13882 451 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 GBX1Q14549 363 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 NDUFA9Q16795 377 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 MINDY4Q4G0A6 757 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 ICE2Q659A1 982 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 SUSD1Q6UWL2 747 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.29■□□□□ 0.36
ABCD4-228ENST00000557588 ANKRD37Q7Z713 158 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 LRRC6Q86X45 466 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 CNGA4Q8IV77 575 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 TAB3Q8N5C8 712 aaPredicted RBP17.29■□□□□ 0.36
ABCD4-228ENST00000557588 SLC5A8Q8N695 610 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 OR9A1PQ8NGU1 263 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 M1APQ8TC57 530 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 ALG3Q92685 438 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 CXXC4Q9H2H0 198 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 PCYOX1Q9UHG3 505 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 ANAPC5Q9UJX4 755 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 TCAF1Q9Y4C2 921 aa17.29■□□□□ 0.36
ABCD4-228ENST00000557588 INTS1Q8N201 2190 aaKnown RBP17.28■□□□□ 0.36
ABCD4-228ENST00000557588 CDK2AP1O14519 115 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 NSA2O95478 260 aaKnown RBP17.28■□□□□ 0.36
ABCD4-228ENST00000557588 OC90Q02509 493 aaPredicted RBP17.28■□□□□ 0.36
ABCD4-228ENST00000557588 PRDX1Q06830 199 aaKnown RBP17.28■□□□□ 0.36
ABCD4-228ENST00000557588 ARHGAP19Q14CB8 494 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 RNFT1Q5M7Z0 435 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 PCGF5Q86SE9 256 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 MPP5Q8N3R9 675 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 OR9A4Q8NGU2 314 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 SLC35B2Q8TB61 432 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 OLFM1Q99784 485 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 TAC3Q9UHF0 121 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 ACANP16112 2415 aa17.28■□□□□ 0.36
ABCD4-228ENST00000557588 SOWAHDA6NJG2 315 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 ARHGEF33A8MVX0 844 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 NME2P1O60361 137 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 NME2P22392 152 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 DNAJA1P31689 397 aaKnown RBP17.27■□□□□ 0.36
ABCD4-228ENST00000557588 ST13P50502 369 aaKnown RBP17.27■□□□□ 0.36
ABCD4-228ENST00000557588 ANKRD20A4Q4UJ75 823 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 MFSD4BQ5TF39 518 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 SLC25A25Q6KCM7 469 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 PPP1R21Q6ZMI0 780 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 MMP21Q8N119 569 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 MARVELD2Q8N4S9 558 aa17.27■□□□□ 0.36
ABCD4-228ENST00000557588 LRFN1Q9P244 771 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms