RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SUCOQ9UBS9 1254 aaKnown RBP12.01□□□□□ -0.49
SHMT2-233ENST00000557529 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-233ENST00000557529 ASPDHA6ND91 283 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 ANKDD1BA6NHY2 528 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 AXIN1O15169 862 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 FKBP6O75344 327 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 PSMG1O95456 288 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 ETHE1O95571 254 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 CTSEP14091 401 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 TIA1P31483 386 aaKnown RBP eCLIP12□□□□□ -0.493e-16■■■□□ 15.8
SHMT2-233ENST00000557529 SLC19A1P41440 591 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 C21orf58P58505 322 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 RACK1P63244 317 aaKnown RBP12□□□□□ -0.49
SHMT2-233ENST00000557529 MEF2AQ02078 507 aaPredicted RBP12□□□□□ -0.49
SHMT2-233ENST00000557529 RBBP5Q15291 538 aaKnown RBP12□□□□□ -0.49
SHMT2-233ENST00000557529 CCDC6Q16204 474 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 FAM174BQ3ZCQ3 159 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 PAGE3Q5JUK9 113 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 GALNT18Q6P9A2 607 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 AAGABQ6PD74 315 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 MSANTD1Q6ZTZ1 278 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 DHDDSQ86SQ9 333 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 AMIGO1Q86WK6 493 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 SYT12Q8IV01 421 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 TRIM48Q8IWZ4 208 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 RNF175Q8N4F7 328 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 TBC1D19Q8N5T2 526 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 C1orf52Q8N6N3 182 aaKnown RBP12□□□□□ -0.49
SHMT2-233ENST00000557529 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 TTLQ8NG68 377 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 OR2A1Q8NGT9 310 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 SLC22A18Q96BI1 424 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 C11orf24Q96F05 449 aaPredicted RBP12□□□□□ -0.49
SHMT2-233ENST00000557529 SLC45A3Q96JT2 553 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 TSSK3Q96PN8 268 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 ZMYND15Q9H091 742 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 IL1RL2Q9HB29 575 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 CUEDC1Q9NWM3 386 aaPredicted RBP12□□□□□ -0.49
SHMT2-233ENST00000557529 AHSPQ9NZD4 102 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 ABCD2Q9UBJ2 740 aa12□□□□□ -0.49
SHMT2-233ENST00000557529 KIR2DS5A0A0G2JLQ3 304 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 A0A0G2JNG1 304 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 H7BY64 318 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 KIR2DS3K7RE56 304 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 PRICKLE3O43900 615 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-233ENST00000557529 KCNH1O95259 989 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 EML2O95834 649 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 PGRP06401 933 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 XRCC1P18887 633 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-233ENST00000557529 SLC6A2P23975 617 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 TACR1P25103 407 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 PSMB5P28074 263 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 GSTM2P28161 218 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 CD38P28907 300 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 CMPK1P30085 196 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 S100A3P33764 101 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 GRK3P35626 688 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 PXNP49023 591 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-233ENST00000557529 DGKQP52824 942 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 CSNK1G2P78368 415 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 RPL6Q02878 288 aaKnown RBP11.99□□□□□ -0.49
SHMT2-233ENST00000557529 SRSF11Q05519 484 aaKnown RBP11.99□□□□□ -0.49
SHMT2-233ENST00000557529 TRAP1Q12931 704 aaKnown RBP11.99□□□□□ -0.49
SHMT2-233ENST00000557529 PWP1Q13610 501 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 FLOT2Q14254 428 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 KIR2DS5Q14953 304 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 MAPKAPK3Q16644 382 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 SPANXN4Q5MJ08 99 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 ADNP2Q6IQ32 1131 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 IYDQ6PHW0 289 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 SLC2A7Q6PXP3 512 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 MAMSTRQ6ZN01 415 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 RIMKLAQ8IXN7 391 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 KRTCAP2Q8N6L1 136 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 ZNF740Q8NDX6 193 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 CLHC1Q8NHS4 586 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 ASB9Q96DX5 294 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 TMEM74Q96NL1 305 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 PRAP1Q96NZ9 151 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 NRTNQ99748 197 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 EBPLQ9BY08 206 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 SRMSQ9H3Y6 488 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 RMND5AQ9H871 391 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 MRPS30Q9NP92 439 aaKnown RBP11.99□□□□□ -0.49
SHMT2-233ENST00000557529 POT1Q9NUX5 634 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 TMEM184CQ9NVA4 438 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 TAAR2Q9P1P5 351 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 CD300AQ9UGN4 299 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 L3MBTL1Q9Y468 752 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 XIRP2A4UGR9 3374 aa11.99□□□□□ -0.49
SHMT2-233ENST00000557529 A0A1W2PR77 199 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 TRBC2A0A5B9 178 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 MAP3K13O43283 966 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 PCDH7O60245 1069 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 BCAS2O75934 225 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 KRT36O76013 467 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 SORBS2O94875 1100 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 SEMA3DO95025 777 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 STAMBPO95630 424 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 TGFB1P01137 390 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms