RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 IL1RNP18510 177 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 CHRM3P20309 590 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 FDXRP22570 491 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 PNLIPRP1P54315 467 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 SIX1Q15475 284 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-210ENST00000557431 INAQ16352 499 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF630Q2M218 657 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-210ENST00000557431 BTBD16Q32M84 506 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 MINDY4Q4G0A6 757 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 ANKRD20A4Q4UJ75 823 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF766Q5HY98 468 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 MPP5Q8N3R9 675 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF808Q8N4W9 903 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-210ENST00000557431 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 ZCCHC10Q8TBK6 192 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 SMPDL3AQ92484 453 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 PEX13Q92968 403 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 CCDC138Q96M89 665 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 NPAS2Q99743 824 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 TRIM8Q9BZR9 551 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 VN1R1Q9GZP7 353 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 DRC3Q9H069 523 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 MKKSQ9NPJ1 570 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-210ENST00000557431 STMN3Q9NZ72 180 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 PAK5Q9P286 719 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 SH2B3Q9UQQ2 575 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 KLF2Q9Y5W3 355 aaPredicted RBP13.33□□□□□ -0.28
SLIRP-210ENST00000557431 OTOGQ6ZRI0 2925 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 PHF3Q92576 2039 aaKnown RBP13.32□□□□□ -0.28
SLIRP-210ENST00000557431 MYO1CO00159 1063 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 SMAPO00193 183 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 KPNA5O15131 536 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 PRPF4O43172 522 aaKnown RBP eCLIP13.32□□□□□ -0.28
SLIRP-210ENST00000557431 SLC19A2O60779 497 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 PSIP1O75475 530 aaKnown RBP13.32□□□□□ -0.28
SLIRP-210ENST00000557431 SLC16A8O95907 504 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 KCNJ1P48048 391 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 HSF1Q00613 529 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 KIF5AQ12840 1032 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 TYSND1Q2T9J0 566 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 RIPOR1Q6ZS17 1223 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 LRRC6Q86X45 466 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 CRLF3Q8IUI8 442 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF295-AS1Q8N0V1 137 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 SUN3Q8TAQ9 357 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 MAGEC3Q8TD91 643 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF480Q8WV37 535 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 RERGQ96A58 199 aaPredicted RBP13.32□□□□□ -0.28
SLIRP-210ENST00000557431 MVB12AQ96EY5 273 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 TGIF2Q9GZN2 237 aa13.32□□□□□ -0.28
SLIRP-210ENST00000557431 E5RI56 91 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 E7ENX8 843 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 H7BY64 318 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 SGK494L7N484 410 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 AVILO75366 819 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 CRYABP02511 175 aaKnown RBP13.31□□□□□ -0.28
SLIRP-210ENST00000557431 TAP2Q03519 686 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 PRDX1Q06830 199 aaKnown RBP13.31□□□□□ -0.28
SLIRP-210ENST00000557431 TRIP13Q15645 432 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-210ENST00000557431 THEMIS2Q5TEJ8 643 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 C3P1Q6ZMU1 363 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 CENPUQ71F23 418 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 VN1R4Q7Z5H5 301 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 CPEB2Q7Z5Q1 589 aaKnown RBP13.31□□□□□ -0.28
SLIRP-210ENST00000557431 REXO1L1PQ8IX06 675 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 PRAP1Q96NZ9 151 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-210ENST00000557431 TUBB6Q9BUF5 446 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 IL22Q9GZX6 179 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 RNF32Q9H0A6 362 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 KCNK13Q9HB14 408 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 BFARQ9NZS9 450 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 MRFAP1Q9Y605 127 aa13.31□□□□□ -0.28
SLIRP-210ENST00000557431 ANKRD17O75179 2603 aaKnown RBP13.3□□□□□ -0.28
SLIRP-210ENST00000557431 ADGRG4Q8IZF6 3080 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 FEZF1A0PJY2 475 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF860A6NHJ4 632 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 NPIPA5E9PKD4 350 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 CDC123O75794 336 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-210ENST00000557431 CATP04040 527 aaKnown RBP13.3□□□□□ -0.28
SLIRP-210ENST00000557431 ESRRAP11474 423 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-210ENST00000557431 PKMP14618 531 aaKnown RBP13.3□□□□□ -0.28
SLIRP-210ENST00000557431 KIR3DL1P43629 444 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 XCR1P46094 333 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 AVPR1BP47901 424 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 VPS41P49754 854 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 EMP3P54852 163 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 TUBA3CQ13748 450 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 GARNL3Q5VVW2 1013 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 SPINK14Q6IE38 97 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 TUBA3EQ6PEY2 450 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 MBOAT1Q6ZNC8 495 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 ANKRD37Q7Z713 158 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 DENND6AQ8IWF6 608 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 LRRC56Q8IYG6 542 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-210ENST00000557431 MDS2Q8NDY4 140 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 DNAJB8Q8NHS0 232 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms