RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CES2O00748 559 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 P2RX6O15547 441 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 HAUS5O94927 633 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 HRH2P25021 359 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 RGS4P49798 205 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 EMP2P54851 167 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 CDC16Q13042 620 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 SP140Q13342 867 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 FAM53BQ14153 422 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 TLR1Q15399 786 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 NDUFA9Q16795 377 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 C4orf17Q53FE4 359 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 CYHR1Q6ZMK1 362 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 LINC00696Q6ZRV3 163 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 NDUFAF7Q7L592 441 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 LAPTM4BQ86VI4 370 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 KBTBD2Q8IY47 623 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 ARHGEF39Q8N4T4 335 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 C2CD4AQ8NCU7 369 aaPredicted RBP13.46□□□□□ -0.25
SNX6-210ENST00000557341 NDNQ99608 321 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 TGIF2Q9GZN2 237 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 RIC8BQ9NVN3 520 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 TAS2R13Q9NYV9 303 aa13.46□□□□□ -0.25
SNX6-210ENST00000557341 POLEQ07864 2286 aa13.46□□□□□ -0.26
SNX6-210ENST00000557341 CROCCQ5TZA2 2017 aa13.46□□□□□ -0.26
SNX6-210ENST00000557341 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 IGHV1-45A0A0A0MS14 117 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 H7BY64 318 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 DNALI1O14645 258 aaPredicted RBP13.45□□□□□ -0.26
SNX6-210ENST00000557341 ZSCAN12O43309 604 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 FOXS1O43638 330 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 TTC4O95801 387 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 C8GP07360 202 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 HEXBP07686 556 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 UQCRHP07919 91 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 AVPR1BP47901 424 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 RPS15AP62244 130 aaKnown RBP13.45□□□□□ -0.26
SNX6-210ENST00000557341 EEF1A2Q05639 463 aaKnown RBP13.45□□□□□ -0.26
SNX6-210ENST00000557341 SPANXN3Q5MJ09 141 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 PCGF5Q86SE9 256 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 PLD3Q8IV08 490 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 SPNS2Q8IVW8 549 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 PALM2Q8IXS6 379 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 MYO1HQ8N1T3 1032 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 ST6GALNAC3Q8NDV1 305 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 MCOLN3Q8TDD5 553 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 C5orf34Q96MH7 638 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 PRAP1Q96NZ9 151 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 LMF1Q96S06 567 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 NAT9Q9BTE0 207 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 PCBD2Q9H0N5 130 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 TMEM184CQ9NVA4 438 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 ERRFI1Q9UJM3 462 aaPredicted RBP13.45□□□□□ -0.26
SNX6-210ENST00000557341 SNX12Q9UMY4 172 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 SLC5A6Q9Y289 635 aa13.45□□□□□ -0.26
SNX6-210ENST00000557341 A1L4Q6 167 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 DYTNA2CJ06 578 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 H0YIG0 161 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 KLHL18O94889 574 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 LDLRP01130 860 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 SERPINA7P05543 415 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 PRR35P0CG20 571 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 CCND1P24385 295 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 AP2B1P63010 937 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 ARG2P78540 354 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 DHX9Q08211 1270 aaKnown RBP13.44□□□□□ -0.26
SNX6-210ENST00000557341 SYT16Q17RD7 645 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 HIST2H2BCQ6DN03 193 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 FAAH2Q6GMR7 532 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 FAM180AQ6UWF9 173 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 RIPOR1Q6ZS17 1223 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 KIAA0408Q6ZU52 694 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 ZC3H7AQ8IWR0 971 aaKnown RBP13.44□□□□□ -0.26
SNX6-210ENST00000557341 BRIX1Q8TDN6 353 aaKnown RBP13.44□□□□□ -0.26
SNX6-210ENST00000557341 GRHL3Q8TE85 626 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 EEF1AKMT1Q8WVE0 214 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 SLCO2A1Q92959 643 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 CERS2Q96G23 380 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 CCDC138Q96M89 665 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 DDX47Q9H0S4 455 aaKnown RBP13.44□□□□□ -0.26
SNX6-210ENST00000557341 PTGFRNQ9P2B2 879 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 ADAMTS6Q9UKP5 1117 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 MKL2Q9ULH7 1088 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 PDE10AQ9Y233 779 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 MRPS2Q9Y399 296 aaKnown RBP13.44□□□□□ -0.26
SNX6-210ENST00000557341 ITPR2Q14571 2701 aa13.44□□□□□ -0.26
SNX6-210ENST00000557341 LOC102723996A0A087X1L8 192 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 PABPN1LA6NDY0 278 aaKnown RBP13.43□□□□□ -0.26
SNX6-210ENST00000557341 E2F3O00716 465 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 SLC16A5O15375 505 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 BANF1O75531 89 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 NSA2O95478 260 aaKnown RBP13.43□□□□□ -0.26
SNX6-210ENST00000557341 STATHP02808 62 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 CYC1P08574 325 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 C8orf89P0DMQ9 161 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 EDN3P14138 238 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 SOX11P35716 441 aa13.43□□□□□ -0.26
SNX6-210ENST00000557341 MAT1AQ00266 395 aaKnown RBP13.43□□□□□ -0.26
SNX6-210ENST00000557341 RBM20Q5T481 1227 aaKnown RBP13.43□□□□□ -0.26
SNX6-210ENST00000557341 AGTRAPQ6RW13 159 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms