RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 WDR26Q9H7D7 661 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RPF1Q9H9Y2 349 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 EFCAB1Q9HAE3 211 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PREBQ9HCU5 417 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SEPSECSQ9HD40 501 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TXNRD2Q9NNW7 524 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TCF7L2Q9NQB0 619 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SMYD2Q9NRG4 433 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TMEM45AQ9NWC5 275 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 UTP6Q9NYH9 597 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RCOR3Q9P2K3 495 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RSL24D1Q9UHA3 163 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 HEY1Q9Y5J3 304 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3DA0A087WVF3 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3IA0A087WXS9 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3EA0A087X179 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3KA0A087X1G2 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PRSS51A0A1B0GVH4 220 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 MAGEB16A2A368 324 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3BA6NDS4 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3FA6NER0 549 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TTC36A6NLP5 189 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TRPC5OSA6NMA1 111 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3LB9A6J9 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CXCL11O14625 94 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ZNF195O14628 629 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 HDAC3O15379 428 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 HNRNPRO43390 633 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 UGT1A9O60656 530 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 USP12O75317 370 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TADA2AO75478 443 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 LYPLA1O75608 230 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TRMUO75648 421 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CNTN5O94779 1100 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PGM3O95394 542 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ALDOAP04075 364 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PGK2P07205 417 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3HP0C7X1 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TGFB3P10600 412 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ETS2P15036 469 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ZNF23P17027 643 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CYP2F1P24903 491 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TTKP33981 857 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TCF7P36402 384 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SERPINB5P36952 375 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PPARGP37231 505 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 NUDT2P50583 147 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CDK9P50750 372 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 KPNA2P52292 529 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ESRRGP62508 458 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PPIDQ08752 370 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 INCA1Q0VD86 236 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 LAMTOR4Q0VGL1 99 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TRAP1Q12931 704 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PRKAA1Q13131 559 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PPIL2Q13356 520 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ART3Q13508 389 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 LPIN1Q14693 890 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PIGGQ5H8A4 983 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TCHHL1Q5QJ38 904 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CELF3Q5SZQ8 465 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ATF7IP2Q5U623 682 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 LIPMQ5VYY2 423 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CES4AQ5XG92 561 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SEL1L3Q68CR1 1132 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3GQ6DHY5 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3CQ6IPX1 549 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 KRT80Q6KB66 452 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 RWDD4Q6NW29 188 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SCYL2Q6P3W7 929 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CASC4Q6P4E1 433 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 DHRS4L2Q6PKH6 230 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 LCLAT1Q6UWP7 414 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 METTL7BQ6UX53 244 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CYP4V2Q6ZWL3 525 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 FAM57BQ71RH2 274 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ZNF534Q76KX8 674 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 ZNF554Q86TJ5 538 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TRIM74Q86UV6 250 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TRIM73Q86UV7 250 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 MOGAT3Q86VF5 341 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SNX32Q86XE0 403 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PSTKQ8IV42 348 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SLC44A2Q8IWA5 706 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CCDC117Q8IWD4 279 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TBC1D3Q8IZP1 549 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 DSELQ8IZU8 1212 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PACRGLQ8N7B6 248 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TRIML2Q8N7C3 387 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TDRD5Q8NAT2 981 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SRFBP1Q8NEF9 429 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 TNIP2Q8NFZ5 429 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 PDCD6IPQ8WUM4 868 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 HTR3CQ8WXA8 447 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 RSPH1Q8WYR4 309 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CNBD2Q96M20 576 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 CCT7Q99832 543 aa4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SNRNP25Q9BV90 132 aaKnown RBP4.61□□□□□ -1.67
ATXN3-246ENST00000557030 SLC2A11Q9BYW1 496 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms