RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PFKFB1P16118 471 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SLC9A1P19634 815 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 FSTP19883 344 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 NOS3P29474 1203 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 AKT1P31749 480 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SERPINB6P35237 376 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 PPP1R2P41236 205 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ZNF165P49910 485 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ATP5J2P56134 94 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 STX17P56962 302 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 NOMO3P69849 1222 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ITGA9Q13797 1035 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 VEZF1Q14119 521 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 EXOC3L4Q17RC7 722 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 CLEC12BQ2HXU8 276 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 PPP6R3Q5H9R7 873 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 RPS26P11Q5JNZ5 115 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 WASHC2DQ5SRD0 308 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 PLEKHM3Q6ZWE6 761 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 CPEB2Q7Z5Q1 589 aaKnown RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 RPS19BP1Q86WX3 136 aaKnown RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 MEX3DQ86XN8 651 aaKnown RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 PSTKQ8IV42 348 aaKnown RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SULF2Q8IWU5 870 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 FMR1NBQ8N0W7 255 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 C3orf56Q8N813 242 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ZFP62Q8NB50 900 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 MAPK1IP1LQ8NDC0 245 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 DDHD1Q8NEL9 900 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 OR52N2Q8NGI0 321 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 PPP1R14CQ8TAE6 165 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 TMEM171Q8WVE6 324 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 TFGQ92734 400 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SLCO2A1Q92959 643 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SARAFQ96BY9 339 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ZNF653Q96CK0 615 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 FAF2Q96CS3 445 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 MVB12AQ96EY5 273 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 DHTKD1Q96HY7 919 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 LCORQ96JN0 433 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 LINC00615Q96LM1 132 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SMC6Q96SB8 1091 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SELENOSQ9BQE4 189 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 CDCP1Q9H5V8 836 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ASB8Q9H765 288 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 TRIM45Q9H8W5 580 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 MMP25Q9NPA2 562 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 LUC7LQ9NQ29 371 aaKnown RBP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 RBM22Q9NW64 420 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATXN3-245ENST00000556958 POLG2Q9UHN1 485 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 DNAJC12Q9UKB3 198 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 TTLL3Q9Y4R7 772 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ARID1AO14497 2285 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ANKRD36A6QL64 1941 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 BICDL2A1A5D9 508 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 SH3D21A4FU49 640 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 FCHO1O14526 889 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 MATN3O15232 486 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 UGT1A9O60656 530 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 SEC24DO94855 1032 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 FGFR1OPO95684 399 aaKnown RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ANXA5P08758 320 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 RALBP11234 206 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 CREB1P16220 341 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 SRD5A1P18405 259 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 UGT1A6P19224 532 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 MAGP20916 626 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 MCM3P25205 808 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 IDUAP35475 653 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 RFC3P40938 356 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 AGTR2P50052 363 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 HLCSP50747 726 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 EFNA3P52797 238 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 NR1H2P55055 460 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 PPIAP62937 165 aaKnown RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 PLGLB1Q02325 96 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 GSTM4Q03013 218 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ACTN3Q08043 901 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 RPA4Q13156 261 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 CAPRIN1Q14444 709 aaKnown RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 SQLEQ14534 574 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 BCL7AQ4VC05 210 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 CCDC38Q502W7 563 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 RTL6Q6ICC9 239 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 DCUN1D2Q6PH85 259 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 FIGLAQ6QHK4 219 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 OTOAQ7RTW8 1153 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 CAND1Q86VP6 1230 aaKnown RBP5.37□□□□□ -1.55
ATXN3-245ENST00000556958 SLC22A16Q86VW1 577 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ZNF677Q86XU0 584 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ARRDC2Q8TBH0 407 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 HM13Q8TCT9 377 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ZUFSPQ96AP4 578 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 ZNF285Q96NJ3 590 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 GSDMAQ96QA5 445 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 CYTH2Q99418 400 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 HGH1Q9BTY7 390 aa5.37□□□□□ -1.55
ATXN3-245ENST00000556958 VPS16Q9H269 839 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms