RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RUFY1Q96T51 708 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 PKP4Q99569 1192 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 TUBA1CQ9BQE3 449 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 C1QTNF4Q9BXJ3 329 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 TLE6Q9H808 572 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 FGF21Q9NSA1 209 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 FAM207AQ9NSI2 230 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-210ENST00000556718 MAD2L2Q9UI95 211 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 APPL1Q9UKG1 709 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 STUB1Q9UNE7 303 aa3.98□□□□□ -1.77
PRPF39-210ENST00000556718 TDRKHQ9Y2W6 561 aaKnown RBP3.98□□□□□ -1.77
PRPF39-210ENST00000556718 IL16Q14005 1332 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 A0A0A6YYC8 382 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 A0A0B4J203 849 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 KRT87PA6NCN2 255 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 NPIPA3F8WFD2 350 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 I3L1I5 382 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 O00370 1275 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF197O14709 1029 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 HSF2BPO75031 334 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 PRDM1O75626 825 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 B3GALNT1O75752 331 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 CAVIN2O95810 425 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 SP9P0CG40 484 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 FGF5P12034 268 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 CPA3P15088 417 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 FERP16591 822 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 IL10P22301 178 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 SSTR1P30872 391 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 TNNT2P45379 298 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 GLIPR1P48060 266 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 BPIFB3P59826 476 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 GFPT1Q06210 699 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 SLC34A1Q06495 639 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 TRAP1Q12931 704 aaKnown RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 ACKR1Q16570 336 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 UGP2Q16851 508 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF672Q499Z4 452 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 SLC35D3Q5M8T2 416 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 PRAMEF8Q5VWM4 474 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 TTC27Q6P3X3 843 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF852Q6ZMS4 543 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 MIER3Q7Z3K6 550 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 GPR141Q7Z602 305 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 AQP12AQ8IXF9 295 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 APCDD1Q8J025 514 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 PHLDA1Q8WV24 401 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 HSD17B8Q92506 261 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF583Q96ND8 569 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 IL17FQ96PD4 163 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 INPP4AQ96PE3 977 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 NAP1L3Q99457 506 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 C1orf21Q9H246 121 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 UBQLN3Q9H347 655 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 RIMS4Q9H426 269 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 LRRC4Q9HBW1 653 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 A4GALTQ9NPC4 353 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 GPR173Q9NS66 373 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 FAF1Q9UNN5 650 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 HBS1LQ9Y450 684 aaKnown RBP3.97□□□□□ -1.77
PRPF39-210ENST00000556718 DOCK7Q96N67 2140 aa3.97□□□□□ -1.77
PRPF39-210ENST00000556718 TRAV18A0A075B6X5 111 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 LOC101059948A0A1B0GTJ6 334 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 PLSCR5A0PG75 271 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 C17orf105B2RV13 164 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 PRSS46E5RG02 174 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 CAPN9O14815 690 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 XPNPEP2O43895 674 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 BCAS2O75934 225 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 APOHP02749 345 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 CETPP11597 493 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 MSH3P20585 1137 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 CA6P23280 308 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 MAZP56270 477 aaKnown RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 LGALS3BPQ08380 585 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 TAF10Q12962 218 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 DMP1Q13316 513 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 OPCMLQ14982 345 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 KIF26BQ2KJY2 2108 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 TOR1AIP1Q5JTV8 583 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 SPDYCQ5MJ68 293 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 KCTD11Q693B1 232 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 PRSS55Q6UWB4 352 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 PRSS42Q7Z5A4 293 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 SLC9B2Q86UD5 537 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 RTN4RL2Q86UN3 420 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 EID3Q8N140 333 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 SFRP1Q8N474 314 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 NEK11Q8NG66 645 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 OR10Q1Q8NGQ4 319 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 OR52N5Q8NH56 324 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 GRHL3Q8TE85 626 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 MAP3K3Q99759 626 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 FAM49AQ9H0Q0 323 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 PRMT8Q9NR22 394 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 DNAJC11Q9NVH1 559 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 FAM118AQ9NWS6 357 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 CYP39A1Q9NYL5 469 aa3.96□□□□□ -1.78
PRPF39-210ENST00000556718 C19orf25Q9UFG5 118 aaPredicted RBP3.96□□□□□ -1.78
PRPF39-210ENST00000556718 SLC12A6Q9UHW9 1150 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms