RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 KBTBD13C9JR72 458 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 SLC33A1O00400 549 aaPredicted RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 CTDSPLO15194 276 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 EXTL3O43909 919 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 MOCS2O96007 188 aaPredicted RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 ATP1B1P05026 303 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 HMBSP08397 361 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 PATE4P0C8F1 98 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 FAM157CP0CG43 387 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 ITGB6P18564 788 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 ITIH1P19827 911 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 SSTR1P30872 391 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 CDKN1AP38936 164 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 ANP32AP39687 249 aaKnown RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 NPBWR1P48145 328 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 MYL7Q01449 175 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 RBM39Q14498 530 aaKnown RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 ZNF674Q2M3X9 581 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 ZNF876PQ49A33 203 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 IQCCQ4KMZ1 466 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 USP43Q70EL4 1123 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 EGFL6Q8IUX8 553 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 APLFQ8IW19 511 aaPredicted RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 RCOR2Q8IZ40 523 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 NIPA2Q8N8Q9 360 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 LRTM2Q8N967 370 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 TMEM178AQ8NBL3 297 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 GPRC5AQ8NFJ5 357 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 ZNF501Q96CX3 271 aaPredicted RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 SGF29Q96ES7 293 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 BTBD9Q96Q07 612 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 HNRNPABQ99729 332 aaKnown RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 PIGQQ9BRB3 760 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 FSD1Q9BTV5 496 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 THAP2Q9H0W7 228 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 RAVER2Q9HCJ3 691 aaKnown RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 ZNF71Q9NQZ8 489 aaPredicted RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 SLCO1C1Q9NYB5 712 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 EPHA6Q9UF33 1036 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 LEF1Q9UJU2 399 aaPredicted RBP3.34□□□□□ -1.87
GPHN-214ENST00000556633 GMEB2Q9UKD1 530 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 PPP2R2CQ9Y2T4 447 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 KLK4Q9Y5K2 254 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 IL16Q14005 1332 aa3.34□□□□□ -1.87
GPHN-214ENST00000556633 IGHV4-4A0A075B6R2 117 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 SNURFLB1AK76 121 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 FMO6PO60774 539 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 AP2A2O94973 939 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 AMBPP02760 352 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 SP1P08047 785 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 SP9P0CG40 484 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 EEF2P13639 858 aaKnown RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 CEACAM1P13688 526 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 PIK3R1P27986 724 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 DUTP33316 252 aaKnown RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 FRKP42685 505 aaPredicted RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 GLIPR1P48060 266 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 ASIC1P78348 528 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 SP3Q02447 781 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 RCN2Q14257 317 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 EXT1Q16394 746 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 GLRA4Q5JXX5 417 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.33□□□□□ -1.88
GPHN-214ENST00000556633 PODNL1Q6PEZ8 512 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 ZNF790Q6PG37 636 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 IYDQ6PHW0 289 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 SNX32Q86XE0 403 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 MEX3DQ86XN8 651 aaKnown RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 CCDC60Q8IWA6 550 aaPredicted RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 OR4C15Q8NGM1 316 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 OR1L3Q8NH93 324 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 UBLCP1Q8WVY7 318 aaPredicted RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 DNASE2BQ8WZ79 361 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 CENPTQ96BT3 561 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 FBXO17Q96EF6 278 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 RBM41Q96IZ5 413 aaKnown RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 C10orf90Q96M02 699 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 F2RL3Q96RI0 385 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 CDCA3Q99618 268 aaPredicted RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 PITPNM3Q9BZ71 974 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 ATP13A3Q9H7F0 1226 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 SRD5A3Q9H8P0 318 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 DNAJC17Q9NVM6 304 aaKnown RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 FBXL5Q9UKA1 691 aa3.33□□□□□ -1.88
GPHN-214ENST00000556633 HBS1LQ9Y450 684 aaKnown RBP3.33□□□□□ -1.88
GPHN-214ENST00000556633 TRAV18A0A075B6X5 111 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 A0A087WYN8 130 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 ILVBLA1L0T0 632 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 MSGN1A6NI15 193 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 SDR42E2A6NKP2 422 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 HHLA1C9JL84 531 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 ZNF263O14978 683 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 SLC16A8O95907 504 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 GH1P01241 217 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 RAF1P04049 648 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 SLC2A2P11168 524 aaPredicted RBP3.32□□□□□ -1.88
GPHN-214ENST00000556633 CD59P13987 128 aa3.32□□□□□ -1.88
GPHN-214ENST00000556633 GNB3P16520 340 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms