RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ACRBPQ8NEB7 543 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 OR9A1PQ8NGU1 263 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 SLC35B2Q8TB61 432 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 PHF10Q8WUB8 498 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 CYTH2Q99418 400 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 UTP23Q9BRU9 249 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 VN1R1Q9GZP7 353 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 ETNK1Q9HBU6 452 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 KLHL1Q9NR64 748 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 MARCH4Q9P2E8 410 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 NPIPA1Q9UND3 350 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 RUVBL2Q9Y230 463 aaKnown RBP11.24□□□□□ -0.61
ACTN1-221ENST00000556571 TCAF1Q9Y4C2 921 aa11.24□□□□□ -0.61
ACTN1-221ENST00000556571 IGKV1-8A0A0C4DH67 115 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 A0A0U1RQJ8 604 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 E7EVH7 732 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 E9PLN8 166 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 ASNA1O43681 348 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 CCNDBP1O95273 360 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 MATN4O95460 622 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 ERGP11308 486 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 EZRP15311 586 aaKnown RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 ABOP16442 354 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 ATP5DP30049 168 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 HSD17B2P37059 387 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 FDFT1P37268 417 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 CD96P40200 585 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 GRIA1P42261 906 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 EFNA3P52797 238 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 CSNK1G2P78368 415 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 KLF1Q13351 362 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 OR1C1Q15619 314 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 FCRLBQ6BAA4 426 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 ZNF425Q6IV72 752 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 SUSD1Q6UWL2 747 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 MEX3BQ6ZN04 569 aaKnown RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 GHDCQ8N2G8 530 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 HORMAD2Q8N7B1 307 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 FAM98AQ8NCA5 519 aaKnown RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 PPHLN1Q8NEY8 458 aaKnown RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 AGAP11Q8TF27 550 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 CA5BP1Q8WTZ4 195 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 SCMH1Q96GD3 660 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 SIGLEC12Q96PQ1 595 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 TREX2Q9BQ50 279 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 VKORC1Q9BQB6 163 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 TSPAN10Q9H1Z9 355 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 SYNPO2LQ9H987 977 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 KCNK13Q9HB14 408 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 R3HDM2Q9Y2K5 976 aaKnown RBP11.23□□□□□ -0.61
ACTN1-221ENST00000556571 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 ABCA2Q9BZC7 2435 aa11.23□□□□□ -0.61
ACTN1-221ENST00000556571 IGHV3-20A0A0C4DH32 117 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 ZNF839A8K0R7 811 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 H0YIG0 161 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 MYO1CO00159 1063 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 PRRG2O14669 202 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 TSPAN12O95859 305 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 AGTR2P50052 363 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 ABATP80404 500 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 GTF3C1Q12789 2109 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 TSTA3Q13630 321 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-221ENST00000556571 PTK6Q13882 451 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 EXT1Q16394 746 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 MINDY4Q4G0A6 757 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 PCID2Q5JVF3 399 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 ICE2Q659A1 982 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 SPINK14Q6IE38 97 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
ACTN1-221ENST00000556571 LANCL3Q6ZV70 420 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 DOLPP1Q86YN1 238 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 SIAH3Q8IW03 269 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 UBL4BQ8N7F7 174 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 M1APQ8TC57 530 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 MCOLN3Q8TDD5 553 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 POM121Q96HA1 1249 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 FRMD6Q96NE9 622 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 DMRTA2Q96SC8 542 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 TRIM51Q9BSJ1 452 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 DESI2Q9BSY9 194 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 HES7Q9BYE0 225 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 CHRAC1Q9NRG0 131 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 FAM114A2Q9NRY5 505 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 ANKRD10Q9NXR5 420 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 COQ3Q9NZJ6 369 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 TAC3Q9UHF0 121 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 PCYOX1Q9UHG3 505 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
ACTN1-221ENST00000556571 NEU2Q9Y3R4 380 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
ACTN1-221ENST00000556571 ANKHD1Q8IWZ3 2542 aaKnown RBP11.22□□□□□ -0.61
ACTN1-221ENST00000556571 SCN2AQ99250 2005 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 ARHGEF33A8MVX0 844 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 H3BMM5 538 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 CDK2AP1O14519 115 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms