RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ALG8Q9BVK2 526 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.03□□□□□ -1.6
SRP54-211ENST00000556445 CDC42EP4Q9H3Q1 356 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 CENPHQ9H3R5 247 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 DPEP3Q9H4B8 488 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 DHX35Q9H5Z1 703 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 CPNE5Q9HCH3 593 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 MAGEE1Q9HCI5 957 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CSNK1G1Q9HCP0 422 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 TMEM161AQ9NX61 479 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 DONSONQ9NYP3 566 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 WSB2Q9NYS7 404 aaPredicted RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 MPP6Q9NZW5 540 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CNIH4Q9P003 139 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 COX16Q9P0S2 106 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 SENP1Q9P0U3 644 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 XPR1Q9UBH6 696 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 BAG5Q9UL15 447 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 PPIEQ9UNP9 301 aaKnown RBP5.03□□□□□ -1.6
SRP54-211ENST00000556445 RCE1Q9Y256 329 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 ITM2BQ9Y287 266 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 CLCA3PQ9Y6N3 262 aa5.03□□□□□ -1.6
SRP54-211ENST00000556445 A0A1W2PQF6 199 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TCRBV21S2A2A0A5A6 115 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CASTOR2A6NHX0 329 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 OR6C75A6NL08 312 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 SLC38A8A6NNN8 435 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 C16orf96A6NNT2 1141 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 ENO4A6NNW6 628 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TEX22C9J3V5 150 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TULP2O00295 520 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 LDLRAD4O15165 306 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 ALOX15BO15296 676 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CHADO15335 359 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 DIAPH2O60879 1101 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 GRAP2O75791 330 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CER1O95813 267 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 RB1P06400 928 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 GSTA2P09210 222 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TPBGLP0DKB5 382 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 NR2F6P10588 404 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 COX7A2P14406 83 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TCF4P15884 667 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 AGAP20933 346 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CYP2F1P24903 491 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TKTP29401 623 aaKnown RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 SERPINB6P35237 376 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 FDFT1P37268 417 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 MAGEA4P43358 317 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 VPS41P49754 854 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 ADARP55265 1226 aaKnown RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 MAP3K7CLP57077 242 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TRA2BP62995 288 aaKnown RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 DYNLT1P63172 113 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 DSC1Q08554 894 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TRIP13Q15645 432 aaPredicted RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 INSCQ1MX18 579 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 ZNF750Q32MQ0 723 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 LEXMQ3ZCV2 418 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 DCAF6Q58WW2 860 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TTMPQ5BVD1 217 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 KCNT1Q5JUK3 1230 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 BRMS1LQ5PSV4 323 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 RNASEH2BQ5TBB1 312 aaKnown RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 GKAP1Q5VSY0 366 aaPredicted RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 DAB2IPQ5VWQ8 1189 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TXNRD3NBQ6F5E7 133 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PM20D1Q6GTS8 502 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 VSTM1Q6UX27 236 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TMEM108Q6UXF1 575 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PAQR9Q6ZVX9 377 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TDRPQ86YL5 185 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 SPATA2LQ8IUW3 424 aaPredicted RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 ARHGAP12Q8IWW6 846 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 FAM185AQ8N0U4 392 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 DEFB106AQ8N104 65 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PLD5Q8N7P1 536 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 OR6C4Q8NGE1 309 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 OR56B2PQ8NGI1 322 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CCDC110Q8TBZ0 833 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 SLC2A12Q8TD20 617 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PRCCQ92733 491 aaPredicted RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 RAB7BQ96AH8 199 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TLCD1Q96CP7 247 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 ALG14Q96F25 216 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PCED1BQ96HM7 432 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CEP295NLQ96MC4 621 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PPP1R2P1Q96PQ5 205 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 PEBP4Q96S96 227 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 NUDT22Q9BRQ3 303 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TMEM175Q9BSA9 504 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TMEM121Q9BTD3 319 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CCDC106Q9BWC9 280 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 ULBP1Q9BZM6 244 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 FAM107BQ9H098 131 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 CXCL16Q9H2A7 254 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 FBXO44Q9H4M3 255 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 SUDS3Q9H7L9 328 aaPredicted RBP5.02□□□□□ -1.61
SRP54-211ENST00000556445 POLR1BQ9H9Y6 1135 aa5.02□□□□□ -1.61
SRP54-211ENST00000556445 TCF7L2Q9NQB0 619 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms