RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CXorf67Q86X51 503 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 EGFL6Q8IUX8 553 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TBC1D21Q8IYX1 336 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CLEC4FQ8N1N0 589 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 LRRC43Q8N309 656 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 SPATA6LQ8N4H0 392 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CBR4Q8N4T8 237 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 DHRSXQ8N5I4 330 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 MINDY1Q8N5J2 469 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 METTL25Q8N6Q8 603 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 PDPRQ8NCN5 879 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF555Q8NEP9 628 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZMIZ2Q8NF64 920 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 OR56A4Q8NGH8 313 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 OR52K2Q8NGK3 314 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 OR14C36Q8NHC7 312 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZFP28Q8NHY6 868 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 RHEBL1Q8TAI7 183 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 RSPH1Q8WYR4 309 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 BORCS5Q969J3 196 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 FBXO32Q969P5 355 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 HDAC10Q969S8 669 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ISOC1Q96CN7 298 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 IMP4Q96G21 291 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CENPNQ96H22 339 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 DNAJC1Q96KC8 554 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 BTN2A3PQ96KV6 586 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NSMCE2Q96MF7 247 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF599Q96NL3 588 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 RPRD1AQ96P16 312 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 GPR78Q96P69 363 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CYP2S1Q96SQ9 504 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 OLFM1Q99784 485 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CINPQ9BW66 212 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 YTHDF1Q9BYJ9 559 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NACA2Q9H009 215 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZCWPW1Q9H0M4 648 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 RBM38Q9H0Z9 239 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 CXCL16Q9H2A7 254 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 HIPK3Q9H422 1215 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TFB2MQ9H5Q4 396 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NOL11Q9H8H0 719 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ARNT2Q9HBZ2 717 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TBCCD1Q9NVR7 557 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM45AQ9NWC5 275 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM248Q9NWD8 314 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 COMMD8Q9NX08 183 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 RHBDL2Q9NX52 303 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 SMPD3Q9NY59 655 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 UBAP1Q9NZ09 502 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NUDT4Q9NZJ9 180 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ACTR3BQ9P1U1 418 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ABCD2Q9UBJ2 740 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 UXTQ9UBK9 157 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 POLG2Q9UHN1 485 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 PRSS50Q9UI38 385 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TRMT6Q9UJA5 497 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 FAM50BQ9Y247 325 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 SNX5Q9Y5X3 404 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 COX11Q9Y6N1 276 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF638Q14966 1978 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 NYNRINQ9P2P1 1898 aaKnown RBP4.3□□□□□ -1.72
ATXN3-241ENST00000556374 VPS13AQ96RL7 3174 aa4.3□□□□□ -1.72
ATXN3-241ENST00000556374 TDRD15B5MCY1 1934 aaKnown RBP4.29□□□□□ -1.72
ATXN3-241ENST00000556374 A0A0J9YVX5 310 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 A0A1W2PP18 115 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 FAM234BA2RU67 622 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 ARL5CA6NH57 179 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 AHRRA9YTQ3 701 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 F5H5T6 163 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 HAS3O00219 553 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 BTN3A1O00481 513 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 FBP2O00757 339 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 GNGT2O14610 69 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 STX16O14662 325 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 EI24O14681 340 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 ARPC2O15144 300 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 KATNA1O75449 491 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 SLC22A3O75751 556 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 STC2O76061 302 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 RASAL1O95294 804 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 GOT2P00505 430 aaKnown RBP4.29□□□□□ -1.72
ATXN3-241ENST00000556374 HPRP00739 348 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 NPPAP01160 153 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 POMCP01189 267 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 ANXA6P08133 673 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 SBK3P0C264 359 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 UROSP10746 265 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 CDH1P12830 882 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 CD1DP15813 335 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF26P17031 533 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF37AP17032 561 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-241ENST00000556374 TSPAN8P19075 237 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 GPX3P22352 226 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 YWHAQP27348 245 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 GABRB3P28472 473 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 AKT1P31749 480 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 TTPAP49638 278 aa4.29□□□□□ -1.72
ATXN3-241ENST00000556374 SUOXP51687 545 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms