RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MUM1Q2TAK8 710 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 GRTP1Q5TC63 336 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 MLIPQ5VWP3 458 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 MRPL14Q6P1L8 145 aaKnown RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 RAB43Q86YS6 212 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 RELL1Q8IUW5 271 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 APLFQ8IW19 511 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 CSNK1A1LQ8N752 337 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 CEP112Q8N8E3 955 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 OR2Y1Q8NGV0 311 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 OR56A3Q8NH54 315 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 ANKRD49Q8WVL7 239 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 RERGQ96A58 199 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-205ENST00000556310 C10orf90Q96M02 699 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 OR2A5Q96R48 311 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 FMO2Q99518 471 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 HAUS8Q9BT25 410 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 DERL2Q9GZP9 239 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 SYNPO2LQ9H987 977 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 CAB39LQ9H9S4 337 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 SLC22A11Q9NSA0 550 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 TMEM184CQ9NVA4 438 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 SH2B3Q9UQQ2 575 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 OARD1Q9Y530 152 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 MED13Q9UHV7 2174 aa11.01□□□□□ -0.65
SLIRP-205ENST00000556310 PCSK5Q92824 1860 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 HELZ2Q9BYK8 2649 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 H7BY64 318 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 CDC7O00311 574 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 TXNDC9O14530 226 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 PHGDHO43175 533 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 CNOT3O75175 753 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 RFPL1O75677 317 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 MED26O95402 600 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 GUCA1CO95843 209 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 ALBP02768 609 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 PHBP35232 272 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 FOLR3P41439 243 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 RAB10P61026 200 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 RPS15AP62244 130 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 CSNK1G2P78368 415 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 COL9A2Q14055 689 aaPredicted RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 SLMAPQ14BN4 828 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 EFTUD2Q15029 972 aaKnown RBP eCLIP11□□□□□ -0.65
SLIRP-205ENST00000556310 TSNQ15631 228 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 ZXDCQ2QGD7 858 aaPredicted RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 FAM69BQ5VUD6 431 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 GARNL3Q5VVW2 1013 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 PRMT9Q6P2P2 845 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 FRA10AC1Q70Z53 315 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 COX15Q7KZN9 410 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 ALKBH8Q96BT7 664 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 PYCR2Q96C36 320 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 MVB12AQ96EY5 273 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 CABS1Q96KC9 395 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 PRAP1Q96NZ9 151 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 SLC25A18Q9H1K4 315 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 SLC26A1Q9H2B4 701 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 WDR54Q9H977 334 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 NINJ2Q9NZG7 142 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 CTNNAL1Q9UBT7 734 aa11□□□□□ -0.65
SLIRP-205ENST00000556310 RUVBL1Q9Y265 456 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 PTRH2Q9Y3E5 179 aaKnown RBP11□□□□□ -0.65
SLIRP-205ENST00000556310 KCNE1BA0A087WTH5 132 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 MKRN2OSH3BPM6 223 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 P2RX6O15547 441 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 FAM155BO75949 473 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ANXA5P08758 320 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 CDH1P12830 882 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 NPPBP16860 134 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ECHS1P30084 290 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 HNMTP50135 292 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ATP6V0D1P61421 351 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 NFATC3Q12968 1075 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 HKDC1Q2TB90 917 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 CPZQ66K79 652 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 OVCH1Q7RTY7 1134 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 VN1R4Q7Z5H5 301 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 MRGPREQ86SM8 312 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 PLD3Q8IV08 490 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ARHGEF39Q8N4T4 335 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 DTWD1Q8N5C7 304 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 METTL27Q8N6F8 245 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ABHD11Q8NFV4 315 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 C9orf43Q8TAL5 461 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-205ENST00000556310 IFT81Q8WYA0 676 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 IP6K3Q96PC2 410 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 OR4K3Q96R72 315 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 CYTH2Q99418 400 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 EGFL8Q99944 293 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 FUT8Q9BYC5 575 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 CDC42EP4Q9H3Q1 356 aaKnown RBP10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ACSS3Q9H6R3 686 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 CTSFQ9UBX1 484 aa10.99□□□□□ -0.65
SLIRP-205ENST00000556310 NXT1Q9UKK6 140 aaKnown RBP10.99□□□□□ -0.65
SLIRP-205ENST00000556310 ARGFXA6NJG6 315 aa10.98□□□□□ -0.65
SLIRP-205ENST00000556310 PRPF4O43172 522 aaKnown RBP eCLIP10.98□□□□□ -0.65
SLIRP-205ENST00000556310 UMODP07911 640 aa10.98□□□□□ -0.65
SLIRP-205ENST00000556310 SLC35E2BP0CK96 405 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms