RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 C2orf54Q08AI8 447 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 ABRQ12979 859 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 SEMA5AQ13591 1074 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 THOC5Q13769 683 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 NFE2L1Q14494 772 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 MAP9Q49MG5 647 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 KHDC1Q4VXA5 237 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 C3orf38Q5JPI3 329 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 DNTTIP2Q5QJE6 756 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 TSTD2Q5T7W7 516 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 ANKRD22Q5VYY1 191 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 IZUMO3Q5VZ72 239 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PAPD7Q5XG87 772 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 KCTD11Q693B1 232 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PDPK2PQ6A1A2 396 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PTRHD1Q6GMV3 140 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 DRICH1Q6PGQ1 229 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 NAPRTQ6XQN6 538 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 RBM44Q6ZP01 1051 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 NLRP9Q7RTR0 991 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 SNX20Q7Z614 316 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PCGF5Q86SE9 256 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 GLRX5Q86SX6 157 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 SLC9B2Q86UD5 537 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PIM3Q86V86 326 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 TMPRSS12Q86WS5 348 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 CLDN19Q8N6F1 224 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 ARL10Q8N8L6 244 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 OR10H5Q8NGA6 315 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 OR6C4Q8NGE1 309 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 OR4L1Q8NH43 312 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 ZFP28Q8NHY6 868 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 GSDMBQ8TAX9 411 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 SKA2Q8WVK7 121 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 JPH3Q8WXH2 748 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 ELMO1Q92556 727 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 NAT6Q93015 286 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 RTP4Q96DX8 246 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 RNF31Q96EP0 1072 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 CFAP36Q96G28 342 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PRR11Q96HE9 360 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 NAF1Q96HR8 494 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 ZNF778Q96MU6 729 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 COPS8Q99627 209 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 TRIM51Q9BSJ1 452 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 CCM2Q9BSQ5 444 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 NDC1Q9BTX1 674 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 WWP1Q9H0M0 922 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 DPH5Q9H2P9 285 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 RDH14Q9HBH5 336 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 ARNT2Q9HBZ2 717 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 CASS4Q9NQ75 786 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 IMP3Q9NV31 184 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PARPBPQ9NWS1 579 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 SYBUQ9NX95 663 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 VPS18Q9P253 973 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 TBC1D29Q9UFV1 150 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 TDRKHQ9Y2W6 561 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 SNX24Q9Y343 169 aa4.54□□□□□ -1.68
ATXN3-237ENST00000556274 PCYT1BQ9Y5K3 369 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 CFAP20Q9Y6A4 193 aaKnown RBP4.54□□□□□ -1.68
ATXN3-237ENST00000556274 SDK2Q58EX2 2172 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 DMDP11532 3685 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PRAMEF33A0A0G2JMD5 474 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 MAGEB16A2A368 324 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 OR5K4A6NMS3 321 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 OR52A4PA6NMU1 304 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 EFCAB8A8MWE9 144 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 F8W8V4 182 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CCDC188H7C350 402 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CES2O00748 559 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PFDN6O15212 129 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 OR1I1O60431 355 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 FAM20BO75063 409 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 BANF1O75531 89 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 RASSF9O75901 435 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 SUN1O94901 812 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 SCAF4O95104 1147 aaKnown RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 S100BP04271 92 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 SLC35G4P0C7Q5 338 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 OR56A5P0C7T3 313 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PF4V1P10720 104 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 F3P13726 295 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 TPSB2P20231 275 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CHRM3P20309 590 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 RBMS1P29558 406 aaKnown RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ARCN1P48444 511 aaKnown RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ZNF140P52738 457 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CTSCP53634 463 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PTTG1IPP53801 180 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 EIF3BP55884 814 aaKnown RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 XIAPP98170 497 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CDK16Q00536 496 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 PRKG2Q13237 762 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 ILKQ13418 452 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 FOXE3Q13461 319 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 BOP1Q14137 746 aaKnown RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 DHX34Q14147 1143 aaKnown RBP4.53□□□□□ -1.68
ATXN3-237ENST00000556274 CLCA4Q14CN2 919 aa4.53□□□□□ -1.68
ATXN3-237ENST00000556274 TPSAB1Q15661 275 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms